RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 SLC35G6P0C7Q6 338 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 SMIM10L1P0DMW3 83 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 IDO1P14902 403 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 PCSK2P16519 638 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 CD22P20273 847 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 TRHRP34981 398 aaPredicted RBP12.73□□□□□ -0.37
IRF3-225ENST00000600022 PTGS2P35354 604 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 ATP4BP51164 291 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 CCR8P51685 355 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 CORO7P57737 925 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 CHIT1Q13231 466 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 HERC3Q15034 1050 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 GSTA3Q16772 222 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 HIST2H2ACQ16777 129 aaPredicted RBP12.73□□□□□ -0.37
IRF3-225ENST00000600022 XKR7Q5GH72 579 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 XKR6Q5GH73 641 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 C10orf62Q5T681 223 aaPredicted RBP12.73□□□□□ -0.37
IRF3-225ENST00000600022 HIST2H2AA3Q6FI13 130 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 GRHL2Q6ISB3 625 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 SPNS3Q6ZMD2 512 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 TMPRSS11BQ86T26 416 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 CD163Q86VB7 1156 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 CCDC71Q8IV32 467 aaPredicted RBP12.73□□□□□ -0.37
IRF3-225ENST00000600022 LGI4Q8N135 537 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 HORMAD2Q8N7B1 307 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 APCDD1LQ8NCL9 501 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 TMEM52Q8NDY8 209 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 FAM57AQ8TBR7 257 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 PHF10Q8WUB8 498 aaKnown RBP12.73□□□□□ -0.37
IRF3-225ENST00000600022 CHTF18Q8WVB6 975 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 PTCD3Q96EY7 689 aaKnown RBP12.73□□□□□ -0.37
IRF3-225ENST00000600022 SMIM10Q96HG1 83 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 EFCAB11Q9BUY7 163 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 SARGQ9BW04 601 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 DEFB127Q9H1M4 99 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 TUBB1Q9H4B7 451 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 AKTIPQ9H8T0 292 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 PELI2Q9HAT8 420 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 DEPPQ9NTK1 212 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 RNF6Q9Y252 685 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 RNF11Q9Y3C5 154 aa12.73□□□□□ -0.37
IRF3-225ENST00000600022 A0A0G2JN53 185 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 ATP6AP2A0A1C7CYW4 349 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 TCRBV16S1A1N1A0A5B0 115 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 TRBC2A0A5B9 178 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 SAGE2PA6NJ88 616 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 H0YIV9 168 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 MANBAO00462 879 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 GYG2O15488 501 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 ATP6AP2O75787 350 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 IGFBP2P18065 325 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 IL10P22301 178 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 GRK3P35626 688 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 HNRNPFP52597 415 aaKnown RBP12.72□□□□□ -0.37
IRF3-225ENST00000600022 NCALDP61601 193 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 PHEXP78562 749 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 TFF3Q07654 80 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 KLF10Q13118 480 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 LAPTM5Q13571 262 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 PWP1Q13610 501 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 DOC2AQ14183 400 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 CPSF6Q16630 551 aaKnown RBP eCLIP12.72□□□□□ -0.37
IRF3-225ENST00000600022 DNAL1Q4LDG9 190 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 TCHHL1Q5QJ38 904 aaPredicted RBP12.72□□□□□ -0.37
IRF3-225ENST00000600022 FAM219BQ5XKK7 198 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 NXPE4Q6UWF7 544 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 CHSY3Q70JA7 882 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 LARP4Q71RC2 724 aaKnown RBP eCLIP12.72□□□□□ -0.371e-6■■□□□ 13.6
IRF3-225ENST00000600022 FAM98AQ8NCA5 519 aaKnown RBP12.72□□□□□ -0.37
IRF3-225ENST00000600022 NT5CQ8TCD5 201 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 SELENOMQ8WWX9 145 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 UBE2E3Q969T4 207 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 DEFB126Q9BYW3 111 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 LRMDAQ9H2I8 198 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 ARL8BQ9NVJ2 186 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 NDE1Q9NXR1 346 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 ZNF490Q9ULM2 529 aaPredicted RBP12.72□□□□□ -0.37
IRF3-225ENST00000600022 CLDN16Q9Y5I7 305 aa12.72□□□□□ -0.37
IRF3-225ENST00000600022 A0A0G2JMM0 328 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 TRBV11-1A0A0K0K1C0 115 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 A0A1W2PPB8 328 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 A0A1W2PRS3 328 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 TMEM200CA6NKL6 621 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 FAM90A27PA6NNH2 459 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 KIR3DP1A8MWS1 328 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 ANKRD65E5RJM6 399 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 PSMD12O00232 456 aaPredicted RBP12.71□□□□□ -0.37
IRF3-225ENST00000600022 TFECO14948 347 aaPredicted RBP12.71□□□□□ -0.37
IRF3-225ENST00000600022 PEX11AO75192 247 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 TOXO94900 526 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 CAPN3P20807 821 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 PIK3R1P27986 724 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 MAPK1P28482 360 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 HTR6P50406 440 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 GPR143P51810 404 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 ERVK-8P63133 956 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 REEP5Q00765 189 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 RUNX2Q13950 521 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 CYLC2Q14093 348 aaPredicted RBP12.71□□□□□ -0.37
IRF3-225ENST00000600022 SMU1Q2TAY7 513 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms