RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	PCCB	P05166	539 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	CYP2A6	P11509	494 aa	Predicted RBP	10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	RPS2	P15880	293 aa	Known RBP	10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	PTBP1	P26599	531 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	MAPK3	P27361	379 aa	Predicted RBP	10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	LRRC32	Q14392	662 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	TCTE1	Q5JU00	501 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	OTUD3	Q5T2D3	398 aa	Predicted RBP	10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	TIGD3	Q6B0B8	471 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	PHYKPL	Q8IUZ5	450 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	GLS2	Q9UI32	602 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	PCDHGB2	Q9Y5G2	931 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	TECTA	O75443	2155 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	MITF	O75030	526 aa	Predicted RBP	10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	KHDRBS3	O75525	346 aa	Known RBP	10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	LRAT	O95237	230 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	HSD3B2	P26439	372 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	ERP29	P30040	261 aa	Known RBP	10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	GRK3	P35626	688 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	PSPH	P78330	225 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	MAT1A	Q00266	395 aa	Known RBP	10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	IFITM3	Q01628	133 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	MTAP	Q13126	283 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	GPR33	Q49SQ1	333 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	LYPLAL1	Q5VWZ2	237 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	TMEM236	Q5W0B7	351 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	KIAA1211L	Q6NV74	962 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	DBX2	Q6ZNG2	339 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335		Q6ZVL8	140 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	RAB43	Q86YS6	212 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	PLD3	Q8IV08	490 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	OR2L5	Q8NG80	312 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	CXorf40A	Q8TE69	158 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	OTUB2	Q96DC9	234 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	FAM83C	Q9BQN1	747 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	PELO	Q9BRX2	385 aa	Known RBP	10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	ACPT	Q9BZG2	426 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	ZDHHC3	Q9NYG2	299 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	GRHPR	Q9UBQ7	328 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	ENPP5	Q9UJA9	477 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	APC2	O95996	2303 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	NDUFS8	O00217	210 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	OR7A17	O14581	309 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	EIF1B	O60739	113 aa	Known RBP	10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	ELFN1	P0C7U0	828 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	CD36	P16671	472 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	RAB3B	P20337	219 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	EIF1	P41567	113 aa	Known RBP	10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	POLR2L	P62875	67 aa	Known RBP	10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	PIGF	Q07326	219 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	FAM174B	Q3ZCQ3	159 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	CYP27C1	Q4G0S4	372 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	SYTL3	Q4VX76	610 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	EOGT	Q5NDL2	527 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	CCNYL2	Q5T2Q4	361 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	TMEM215	Q68D42	235 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	RTL4	Q6ZR62	310 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	WDR48	Q8TAF3	677 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	GTF3A	Q92664	365 aa	Known RBP	10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	SCRN2	Q96FV2	425 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	PPP3R2	Q96LZ3	170 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	NSMCE2	Q96MF7	247 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	TSSK3	Q96PN8	268 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	IL1RAP	Q9NPH3	570 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	CD300A	Q9UGN4	299 aa		10.78	□□□□□ -0.68
SUPT5H-216	ENST00000599335	SEC16A	O15027	2179 aa		10.77	□□□□□ -0.68
SUPT5H-216	ENST00000599335	FAM234B	A2RU67	622 aa		10.77	□□□□□ -0.68
SUPT5H-216	ENST00000599335	MATN4	O95460	622 aa		10.77	□□□□□ -0.68
SUPT5H-216	ENST00000599335	ZNF26	P17031	533 aa	Predicted RBP	10.77	□□□□□ -0.68
SUPT5H-216	ENST00000599335	GSK3A	P49840	483 aa		10.77	□□□□□ -0.68
SUPT5H-216	ENST00000599335	SKP1	P63208	163 aa		10.77	□□□□□ -0.68
SUPT5H-216	ENST00000599335	HABP2	Q14520	560 aa	Predicted RBP	10.77	□□□□□ -0.68
SUPT5H-216	ENST00000599335	SLC16A12	Q6ZSM3	486 aa		10.77	□□□□□ -0.68
SUPT5H-216	ENST00000599335	ATCAY	Q86WG3	371 aa		10.77	□□□□□ -0.68
SUPT5H-216	ENST00000599335	GPR65	Q8IYL9	337 aa		10.77	□□□□□ -0.68
SUPT5H-216	ENST00000599335	LIX1	Q8N485	282 aa		10.77	□□□□□ -0.68
SUPT5H-216	ENST00000599335	CD244	Q9BZW8	370 aa		10.77	□□□□□ -0.68
SUPT5H-216	ENST00000599335	ADAM19	Q9H013	955 aa		10.77	□□□□□ -0.68
SUPT5H-216	ENST00000599335	NANOG	Q9H9S0	305 aa		10.77	□□□□□ -0.68
SUPT5H-216	ENST00000599335	TMEM9	Q9P0T7	183 aa		10.77	□□□□□ -0.68
SUPT5H-216	ENST00000599335	ANAPC1	Q9H1A4	1944 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335		A0A0X1KG70	313 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	GNGT2	O14610	69 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	KLK3	P07288	261 aa	Predicted RBP	10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	HBQ1	P09105	142 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	INHBB	P09529	407 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	CKMT1A	P12532	417 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	LHCGR	P22888	699 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	METAP1	P53582	386 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	DGCR6	Q14129	220 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	MFSD13A	Q14CX5	517 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	GPRC6A	Q5T6X5	926 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	PAPD4	Q6PIY7	484 aa	Known RBP	10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	GDPD4	Q6W3E5	623 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	HACD2	Q6Y1H2	254 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	C17orf107	Q6ZR85	190 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	PAGE2	Q7Z2X7	111 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	GALNTL5	Q7Z4T8	443 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	MINDY1	Q8N5J2	469 aa		10.77	□□□□□ -0.69
SUPT5H-216	ENST00000599335	TMEM102	Q8N9M5	508 aa	Predicted RBP	10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms