RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 DCAF7P61962 342 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 C2orf80Q0P641 193 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 FUT7Q11130 342 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 MAP4K2Q12851 820 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 EBPQ15125 230 aaKnown RBP13.07□□□□□ -0.32
LIG1-218ENST00000599322 TBCELQ5QJ74 424 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 ARHGAP11AQ6P4F7 1023 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 RPTNQ6XPR3 784 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 DGAT2L6Q6ZPD8 337 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 BANPQ8N9N5 519 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 OR2M7Q8NG81 312 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 C16orf78Q8WTQ4 265 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 APIPQ96GX9 242 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 FAM111AQ96PZ2 611 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 KCNA7Q96RP8 456 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 RUBCNLQ9H714 662 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 EXO5Q9H790 373 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 B4GALT7Q9UBV7 327 aa13.07□□□□□ -0.32
LIG1-218ENST00000599322 BOKQ9UMX3 212 aaPredicted RBP13.07□□□□□ -0.32
LIG1-218ENST00000599322 DOPEY1Q5JWR5 2465 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 CELSR2Q9HCU4 2923 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 WIPF3A6NGB9 483 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 HRKO00198 91 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 SPAG7O75391 227 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 SEC22BO75396 215 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 RSL1D1O76021 490 aaKnown RBP13.06□□□□□ -0.32
LIG1-218ENST00000599322 NEFHP12036 1026 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 CHN1P15882 459 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 SSTR4P31391 388 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 KRT20P35900 424 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 RFC3P40938 356 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 HTR6P50406 440 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 ZNF763Q0D2J5 394 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 TMEM198Q66K66 360 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 GALNT18Q6P9A2 607 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 TRIM46Q7Z4K8 759 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 MREGQ8N565 214 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 UCN3Q969E3 161 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 EXOSC8Q96B26 276 aaKnown RBP13.06□□□□□ -0.32
LIG1-218ENST00000599322 TMEM109Q9BVC6 243 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 GATA5Q9BWX5 397 aaPredicted RBP13.06□□□□□ -0.32
LIG1-218ENST00000599322 EBPLQ9BY08 206 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 CENPHQ9H3R5 247 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 LDAHQ9H6V9 325 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 IL1RL2Q9HB29 575 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 SIRT5Q9NXA8 310 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 EHD3Q9NZN3 535 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 CES1P1Q9UKY3 287 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 FIS1Q9Y3D6 152 aa13.06□□□□□ -0.32
LIG1-218ENST00000599322 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.06□□□□□ -0.32
LIG1-218ENST00000599322 NOTCH2Q04721 2471 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 POLEQ07864 2286 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 UBFD1O14562 309 aaKnown RBP13.05□□□□□ -0.32
LIG1-218ENST00000599322 CTIFO43310 598 aaKnown RBP13.05□□□□□ -0.32
LIG1-218ENST00000599322 NPHS1O60500 1241 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 ERLIN1O75477 346 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 CLDN1O95832 211 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 FBXO45P0C2W1 286 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 COL8A1P27658 744 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 NTSP30990 170 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 SERPINB5P36952 375 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 PSPHP78330 225 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 SLC10A1Q14973 349 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 ZNF791Q3KP31 576 aaPredicted RBP13.05□□□□□ -0.32
LIG1-218ENST00000599322 SIAH3Q8IW03 269 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 CCDC116Q8IYX3 515 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 CLYBLQ8N0X4 340 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 FAM109AQ8N4B1 249 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 C17orf47Q8NEP4 570 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 OR5M3Q8NGP4 307 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 TCP10LQ8TDR4 215 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 DIO2Q92813 273 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 ERP27Q96DN0 273 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 DTNBP1Q96EV8 351 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 HSPBAP1Q96EW2 488 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 STMN4Q9H169 189 aaPredicted RBP13.05□□□□□ -0.32
LIG1-218ENST00000599322 DEFB127Q9H1M4 99 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 C12orf65Q9H3J6 166 aaKnown RBP13.05□□□□□ -0.32
LIG1-218ENST00000599322 SLC35C2Q9NQQ7 365 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 NPFFR2Q9Y5X5 522 aa13.05□□□□□ -0.32
LIG1-218ENST00000599322 DIDO1Q9BTC0 2240 aaKnown RBP13.05□□□□□ -0.32
LIG1-218ENST00000599322 CENPEQ02224 2701 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 FAM166BA8MTA8 275 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 G3V3Y1 287 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 ACOX3O15254 700 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 ZG16O60844 167 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 PDE9AO76083 593 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 SLITRK5O94991 958 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 TPOP07202 933 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 CCL3P10147 92 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 NAGAP17050 411 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 DDCP20711 480 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 ALDH3A1P30838 453 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 MASP1P48740 699 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 FOXA1P55317 472 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 PCLAFQ15004 111 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 RPS6KA2Q15349 733 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 C3AR1Q16581 482 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 PRICKLE4Q2TBC4 344 aa13.04□□□□□ -0.32
LIG1-218ENST00000599322 ZNF787Q6DD87 383 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms