RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 CCDC116Q8IYX3 515 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 LIX1Q8N485 282 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 BCORP1Q8N888 145 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 ZNF321PQ8N8H1 164 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 C17orf47Q8NEP4 570 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 LRRC8CQ8TDW0 803 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 PPCDCQ96CD2 204 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 ZNF681Q96N22 645 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 TSSK3Q96PN8 268 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 SIGLEC12Q96PQ1 595 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 RASL10BQ96S79 203 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 PRPF18Q99633 342 aaKnown RBP11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 REEP4Q9H6H4 257 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 TIMMDC1Q9NPL8 285 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 ATAD3AQ9NVI7 634 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 TAS2R7Q9NYW3 318 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 MAT2BQ9NZL9 334 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 PRODH2Q9UF12 536 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 BCAP29Q9UHQ4 241 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 VPS4AQ9UN37 437 aa11.18□□□□□ -0.62
ARHGEF1-216ENST00000598587 EML6Q6ZMW3 1958 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 SPENQ96T58 3664 aaKnown RBP11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 CNTRLQ7Z7A1 2325 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 UQCRHLA0A096LP55 91 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 A0A1W2PS29 197 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 MYO1GB0I1T2 1018 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 HRKO00198 91 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 NME2P1O60361 137 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 TBX19O60806 448 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 COQ9O75208 318 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 SP1P08047 785 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 BCKDHAP12694 445 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 NME2P22392 152 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 TACR1P25103 407 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 DCAF7P61962 342 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 PPP2R2AP63151 447 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 PSPHP78330 225 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 FOXK1P85037 733 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 ELOAQ14241 798 aaKnown RBP11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 MAPKAPK3Q16644 382 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 ZNF750Q32MQ0 723 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 HSP90B2PQ58FF3 399 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 SPINK14Q6IE38 97 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 SLC25A25Q6KCM7 469 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 RTL4Q6ZR62 310 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 CISD2Q8N5K1 135 aaKnown RBP11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 NATD1Q8N6N6 113 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 AMER2Q8N7J2 671 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 GOLM1Q8NBJ4 401 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 GALNT11Q8NCW6 608 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 ADCY4Q8NFM4 1077 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 DNAJB8Q8NHS0 232 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 GFM2Q969S9 779 aaKnown RBP11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 TP53INP1Q96A56 240 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 MIB2Q96AX9 1013 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 SNRNP40Q96DI7 357 aaKnown RBP11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 ZBED6CLQ96FA7 236 aaPredicted RBP11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 SCMH1Q96GD3 660 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 C3orf30Q96M34 536 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 C1orf50Q9BV19 199 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 C20orf27Q9GZN8 174 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 MEAF6Q9HAF1 191 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 KLHL1Q9NR64 748 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 INTS9Q9NV88 658 aaKnown RBP11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 ASIC5Q9NY37 505 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 TAS2R9Q9NYW1 312 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 SHANK1Q9Y566 2161 aa11.17□□□□□ -0.62
ARHGEF1-216ENST00000598587 TMEM200CA6NKL6 621 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 KLRC4-KLRK1H3BQV0 150 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 SCAMP2O15127 329 aaKnown RBP11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 HDAC3O15379 428 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 AKAP10O43572 662 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 NEURL1O76050 574 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 LRATO95237 230 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 JUNP05412 331 aaKnown RBP11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 IFI6P09912 130 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 CT62P0C5K7 136 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 PRPS1L1P21108 318 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 GPC1P35052 558 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 SOX3P41225 446 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 RPP38P78345 283 aaKnown RBP11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 EMX2Q04743 252 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 PDE7AQ13946 482 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 LTB4RQ15722 352 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 ZNF628Q5EBL2 1059 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 PIGGQ5H8A4 983 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 IL23RQ5VWK5 629 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 FAM180BQ6P0A1 224 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 IL20RBQ6UXL0 311 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 ZNF615Q8N8J6 731 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 POGLUT1Q8NBL1 392 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 PSD4Q8NDX1 1056 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 OR9A2Q8NGT5 310 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 CLHC1Q8NHS4 586 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 C16orf52Q8NHV5 167 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 PIWIL2Q8TC59 973 aaKnown RBP11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 GRHL3Q8TE85 626 aa11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 ZNF75CPQ92670 426 aaPredicted RBP11.16□□□□□ -0.62
ARHGEF1-216ENST00000598587 CTHRC1Q96CG8 243 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms