RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 FGF17O60258 216 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 CTNSO60931 367 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 LDB3O75112 727 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 CDC123O75794 336 aaPredicted RBP8.83□□□□□ -1
TRIM28-208ENST00000597172 STK17BO94768 372 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 GPR75O95800 540 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 RECKO95980 971 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 PDGFAP04085 211 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 C8orf89P0DMQ9 161 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 EFNA1P20827 205 aaPredicted RBP8.83□□□□□ -1
TRIM28-208ENST00000597172 IL10P22301 178 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 RPL3P39023 403 aaKnown RBP8.83□□□□□ -1
TRIM28-208ENST00000597172 CPA2P48052 419 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 FOXL2P58012 376 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 PLIN5Q00G26 463 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 ID2Q02363 134 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 ACTN3Q08043 901 aaPredicted RBP8.83□□□□□ -1
TRIM28-208ENST00000597172 STX5Q13190 355 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 MAPRE2Q15555 327 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 CEBPEQ15744 281 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 DPY19L1Q2PZI1 675 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 REP15Q6BDI9 236 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 OR52E8Q6IFG1 317 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 MRPL14Q6P1L8 145 aaKnown RBP8.83□□□□□ -1
TRIM28-208ENST00000597172 DLEU7Q6UYE1 221 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 ANKRD46Q86W74 232 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 ZNF595Q8IYB9 648 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 CLECL1Q8IZS7 167 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 DPP10Q8N608 796 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 SUN3Q8TAQ9 357 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 STARD8Q92502 1023 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 GTF2H4Q92759 462 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 KIAA1143Q96AT1 154 aaPredicted RBP8.83□□□□□ -1
TRIM28-208ENST00000597172 RCN3Q96D15 328 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 OR1F2PQ96R84 312 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 INPP5KQ9BT40 448 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 TUBB6Q9BUF5 446 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 EFHD1Q9BUP0 239 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 CHST8Q9H2A9 424 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 GLIPR2Q9H4G4 154 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 MKKSQ9NPJ1 570 aaPredicted RBP8.83□□□□□ -1
TRIM28-208ENST00000597172 MIEF1Q9NQG6 463 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 CTSFQ9UBX1 484 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 SPACA6W5XKT8 324 aa8.83□□□□□ -1
TRIM28-208ENST00000597172 A0A1W2PRB8 838 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 B2RBV5 119 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 PRSS44E7EML9 344 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 RNASET2O00584 256 aaKnown RBP8.82□□□□□ -1
TRIM28-208ENST00000597172 AIM2O14862 343 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 RAD1O60671 282 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 ERAL1O75616 437 aaKnown RBP8.82□□□□□ -1
TRIM28-208ENST00000597172 SORBS2O94875 1100 aaKnown RBP8.82□□□□□ -1
TRIM28-208ENST00000597172 ALBP02768 609 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 KLK3P07288 261 aaPredicted RBP8.82□□□□□ -1
TRIM28-208ENST00000597172 ZGLP1P0C6A0 271 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 ESRRAP11474 423 aaPredicted RBP8.82□□□□□ -1
TRIM28-208ENST00000597172 HOXB9P17482 250 aaPredicted RBP8.82□□□□□ -1
TRIM28-208ENST00000597172 TCN2P20062 427 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 AGXTP21549 392 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 CALB2P22676 271 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 PTPN6P29350 595 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 SOX18P35713 384 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 CPOXP36551 454 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 FEN1P39748 380 aaKnown RBP8.82□□□□□ -1
TRIM28-208ENST00000597172 CDKN2CP42773 168 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 XKP51811 444 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 HSD17B7P56937 341 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 IGLV3-21P80748 117 aaPredicted RBP8.82□□□□□ -1
TRIM28-208ENST00000597172 RHAGQ02094 409 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 FOLH1Q04609 750 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 NKG7Q16617 165 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 MAPKAPK3Q16644 382 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 ZSCAN26Q16670 478 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 NADK2Q4G0N4 442 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 PRR30Q53SZ7 412 aaPredicted RBP8.82□□□□□ -1
TRIM28-208ENST00000597172 COQ5Q5HYK3 327 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 ATP1A1-AS1Q5TC04 95 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 ANXA8L1Q5VT79 327 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 MLIPQ5VWP3 458 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 FAM198BQ6UWH4 519 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 C6orf15Q6UXA7 325 aaPredicted RBP8.82□□□□□ -1
TRIM28-208ENST00000597172 DGAT2L6Q6ZPD8 337 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 RINLQ6ZS11 566 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 MSANTD1Q6ZTZ1 278 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 ZNF551Q7Z340 670 aaPredicted RBP8.82□□□□□ -1
TRIM28-208ENST00000597172 SCUBE1Q8IWY4 988 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 MSRB3Q8IXL7 192 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 CCDC116Q8IYX3 515 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 PLPP5Q8NEB5 264 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 OR4K14Q8NGD5 310 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 GOT1L1Q8NHS2 421 aaPredicted RBP8.82□□□□□ -1
TRIM28-208ENST00000597172 STT3BQ8TCJ2 826 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 ADAMTS18Q8TE60 1221 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 MR1Q95460 341 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 KLHL29Q96CT2 875 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 SLC7A6OSQ96CW6 309 aaPredicted RBP8.82□□□□□ -1
TRIM28-208ENST00000597172 CCDC115Q96NT0 180 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 AMDHD1Q96NU7 426 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 MDFIQ99750 246 aa8.82□□□□□ -1
TRIM28-208ENST00000597172 DPH2Q9BQC3 489 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms