RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 NTRK2Q16620 822 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 ZNF630Q2M218 657 aaPredicted RBP9.69□□□□□ -0.86
CCDC9-203ENST00000596938 PRICKLE4Q2TBC4 344 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 TBCELQ5QJ74 424 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 C6orf163Q5TEZ5 329 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 HLA-DQA1Q5Y7H0 255 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 TRIM46Q7Z4K8 759 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 SAMD14Q8IZD0 417 aaPredicted RBP9.69□□□□□ -0.86
CCDC9-203ENST00000596938 MMP21Q8N119 569 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 VWA5B2Q8N398 1253 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 FBXW8Q8N3Y1 598 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 FAM109AQ8N4B1 249 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 TMEM251Q8N6I4 163 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 CTHRC1Q96CG8 243 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 GAL3ST4Q96RP7 486 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 SECISBP2Q96T21 854 aaKnown RBP9.69□□□□□ -0.86
CCDC9-203ENST00000596938 PROK2Q9HC23 129 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 MID1IP1Q9NPA3 183 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 ZFP64Q9NPA5 681 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 CHST11Q9NPF2 352 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 TUBA8Q9NY65 449 aaPredicted RBP9.69□□□□□ -0.86
CCDC9-203ENST00000596938 CFL2Q9Y281 166 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 DLGAP4Q9Y2H0 992 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 WBP11Q9Y2W2 641 aaKnown RBP9.69□□□□□ -0.86
CCDC9-203ENST00000596938 TIMM22Q9Y584 194 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 HRH3Q9Y5N1 445 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 NPFFR2Q9Y5X5 522 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 CHCHD2Q9Y6H1 151 aaPredicted RBP9.69□□□□□ -0.86
CCDC9-203ENST00000596938 ZNF780BQ9Y6R6 833 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 SVILO95425 2214 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 ITPR2Q14571 2701 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 FAM166BA8MTA8 275 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 COPEO14579 308 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 TP53I11O14683 189 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 ERAL1O75616 437 aaKnown RBP9.68□□□□□ -0.86
CCDC9-203ENST00000596938 TPOP07202 933 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 NUDT17P0C025 328 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 HTR1EP28566 365 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 SOX18P35713 384 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 DNASE1L1P49184 302 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 HTR6P50406 440 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 FOXA1P55317 472 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 NRG3P56975 720 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 HMGCS1Q01581 520 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 ACSM2AQ08AH3 577 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 HEPACAMQ14CZ8 416 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 GXYLT1Q4G148 440 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 CFAP157Q5JU67 520 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 FAM219BQ5XKK7 198 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 ACSM2BQ68CK6 577 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 TMEM211Q6ICI0 200 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 FRMD7Q6ZUT3 714 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 HOMEZQ8IX15 550 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 LRRC25Q8N386 305 aaPredicted RBP9.68□□□□□ -0.86
CCDC9-203ENST00000596938 FAM13CQ8NE31 585 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 OR10G3Q8NGC4 313 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 FAM76AQ8TAV0 307 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 EPS8L3Q8TE67 593 aaKnown RBP9.68□□□□□ -0.86
CCDC9-203ENST00000596938 C16orf78Q8WTQ4 265 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 KLHL29Q96CT2 875 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 NTNG2Q96CW9 530 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 ERP27Q96DN0 273 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 CNRIP1Q96F85 164 aaPredicted RBP9.68□□□□□ -0.86
CCDC9-203ENST00000596938 APIPQ96GX9 242 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 METTL2AQ96IZ6 378 aaKnown RBP9.68□□□□□ -0.86
CCDC9-203ENST00000596938 KCNA7Q96RP8 456 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 SHCBP1LQ9BZQ2 653 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 TP63Q9H3D4 680 aaPredicted RBP9.68□□□□□ -0.86
CCDC9-203ENST00000596938 QPCTLQ9NXS2 382 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 MAT2BQ9NZL9 334 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 EHD3Q9NZN3 535 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 HEY2Q9UBP5 337 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 UTS2RQ9UKP6 389 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 CNOT11Q9UKZ1 510 aaKnown RBP9.68□□□□□ -0.86
CCDC9-203ENST00000596938 BOKQ9UMX3 212 aaPredicted RBP9.68□□□□□ -0.86
CCDC9-203ENST00000596938 ZGRF1Q86YA3 2104 aa9.68□□□□□ -0.86
CCDC9-203ENST00000596938 ADGRG4Q8IZF6 3080 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 ATP6AP2A0A1C7CYW4 349 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 GNG14A0A1W2PPG7 69 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 SMIM23A6NLE4 172 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 AQP7O14520 342 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 BCKDKO14874 412 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 PCDH7O60245 1069 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 HCN1O60741 890 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 TRIM3O75382 744 aaPredicted RBP9.67□□□□□ -0.86
CCDC9-203ENST00000596938 ATP6AP2O75787 350 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 BCAS2O75934 225 aaPredicted RBP9.67□□□□□ -0.86
CCDC9-203ENST00000596938 SNX4O95219 450 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 CLDN14O95500 239 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 IL3P08700 152 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 ANXA4P09525 319 aaPredicted RBP9.67□□□□□ -0.86
CCDC9-203ENST00000596938 UROSP10746 265 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 DRD5P21918 477 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 GPX3P22352 226 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 GRNP28799 593 aaKnown RBP9.67□□□□□ -0.86
CCDC9-203ENST00000596938 TIA1P31483 386 aaKnown RBP eCLIP9.67□□□□□ -0.86
CCDC9-203ENST00000596938 MAGEA5P43359 124 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 PPICP45877 212 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 ALDH9A1P49189 494 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 TMED10P49755 219 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms