RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 TCF7L2Q9NQB0 619 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 AIG1Q9NVV5 245 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 MAT2BQ9NZL9 334 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 NUP214P35658 2090 aaPredicted RBP17.96■□□□□ 0.47
PNKP-207ENST00000596014 ANKRD28O15084 1053 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 SOX18P35713 384 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 FUT7Q11130 342 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 C6orf163Q5TEZ5 329 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 TMEM198Q66K66 360 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 FCRLBQ6BAA4 426 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 FAM111BQ6SJ93 734 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 HSDL2Q6YN16 418 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 LINC00696Q6ZRV3 163 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 RPS19BP1Q86WX3 136 aaKnown RBP17.96■□□□□ 0.47
PNKP-207ENST00000596014 OR9A2Q8NGT5 310 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 CIDECQ96AQ7 238 aaPredicted RBP17.96■□□□□ 0.47
PNKP-207ENST00000596014 CTHRC1Q96CG8 243 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 LMF1Q96S06 567 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 NPAS2Q99743 824 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 SLC25A18Q9H1K4 315 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 MYLK2Q9H1R3 596 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 RASSF4Q9H2L5 321 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 GLIPR2Q9H4G4 154 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 TEKT2Q9UIF3 430 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 ZNF451Q9Y4E5 1061 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 GPR45Q9Y5Y3 372 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 H0YHG0 523 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 PRKNO60260 465 aaPredicted RBP17.95■□□□□ 0.46
PNKP-207ENST00000596014 ZFAND5O76080 213 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 CLPSP04118 112 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 LAMP1P11279 417 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 PCSK2P16519 638 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 DDX5P17844 614 aaKnown RBP17.95■□□□□ 0.46
PNKP-207ENST00000596014 S1PR1P21453 382 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 NTSP30990 170 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 SSTR4P31391 388 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 NCBP2P52298 156 aaKnown RBP eCLIP17.95■□□□□ 0.46
PNKP-207ENST00000596014 NCALDP61601 193 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 RNF4P78317 190 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 BNIP1Q12981 228 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 ZNF628Q5EBL2 1059 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 CPTPQ5TA50 214 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 IGFL2Q6UWQ7 119 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 ASB18Q6ZVZ8 466 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 VWA5B2Q8N398 1253 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 OR8K3Q8NH51 312 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 ZNF675Q8TD23 568 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 THAP3Q8WTV1 239 aaPredicted RBP17.95■□□□□ 0.46
PNKP-207ENST00000596014 COQ8BQ96D53 544 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 ERP27Q96DN0 273 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 ZNF354BQ96LW1 612 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 AMDHD1Q96NU7 426 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 BBC3Q96PG8 261 aaPredicted RBP17.95■□□□□ 0.46
PNKP-207ENST00000596014 PRPF18Q99633 342 aaKnown RBP17.95■□□□□ 0.46
PNKP-207ENST00000596014 DPY30Q9C005 99 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 CDCP1Q9H5V8 836 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 STMN3Q9NZ72 180 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 ZNF639Q9UID6 485 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 MAPRE3Q9UPY8 281 aa17.95■□□□□ 0.46
PNKP-207ENST00000596014 PDPK1O15530 556 aa17.94■□□□□ 0.46
PNKP-207ENST00000596014 MAN1A2O60476 641 aa17.94■□□□□ 0.46
PNKP-207ENST00000596014 SLC37A1P57057 533 aa17.94■□□□□ 0.46
PNKP-207ENST00000596014 MRPS35P82673 323 aaKnown RBP17.94■□□□□ 0.46
PNKP-207ENST00000596014 MFAP5Q13361 173 aa17.94■□□□□ 0.46
PNKP-207ENST00000596014 MEP1AQ16819 746 aa17.94■□□□□ 0.46
PNKP-207ENST00000596014 TRMT12Q53H54 448 aaKnown RBP17.94■□□□□ 0.46
PNKP-207ENST00000596014 ACER2Q5QJU3 275 aa17.94■□□□□ 0.46
PNKP-207ENST00000596014 ABHD17BQ5VST6 288 aa17.94■□□□□ 0.46
PNKP-207ENST00000596014 RNF111Q6ZNA4 994 aa17.94■□□□□ 0.46
PNKP-207ENST00000596014 ARMC10Q8N2F6 343 aa17.94■□□□□ 0.46
PNKP-207ENST00000596014 ZNF615Q8N8J6 731 aa17.94■□□□□ 0.46
PNKP-207ENST00000596014 SIKE1Q9BRV8 207 aa17.94■□□□□ 0.46
PNKP-207ENST00000596014 CCDC28BQ9BUN5 200 aa17.94■□□□□ 0.46
PNKP-207ENST00000596014 TMEM120AQ9BXJ8 343 aa17.94■□□□□ 0.46
PNKP-207ENST00000596014 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.94■□□□□ 0.46
PNKP-207ENST00000596014 DCTN4Q9UJW0 460 aa17.94■□□□□ 0.46
PNKP-207ENST00000596014 TMEM200CA6NKL6 621 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 UBDO15205 165 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 IDO1P14902 403 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 FRKP42685 505 aaPredicted RBP17.93■□□□□ 0.46
PNKP-207ENST00000596014 NME5P56597 212 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 RPS6KA2Q15349 733 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 IGFL3Q6UXB1 125 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 LGI4Q8N135 537 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 SIMC1Q8NDZ2 872 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 OR7G1Q8NGA0 311 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 KAT2AQ92830 837 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 ZBED6CLQ96FA7 236 aaPredicted RBP17.93■□□□□ 0.46
PNKP-207ENST00000596014 MARK4Q96L34 752 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 OR10A5Q9H207 317 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 ATAD3AQ9NVI7 634 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 A0A0G2JND7 137 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 ARFIP2P53365 341 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 MANFP55145 182 aaKnown RBP17.93■□□□□ 0.46
PNKP-207ENST00000596014 MLF1P58340 268 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 UFM1P61960 85 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 EXOSC7Q15024 291 aaKnown RBP17.93■□□□□ 0.46
PNKP-207ENST00000596014 GSTA3Q16772 222 aa17.93■□□□□ 0.46
PNKP-207ENST00000596014 ZNF551Q7Z340 670 aaPredicted RBP17.93■□□□□ 0.46
PNKP-207ENST00000596014 CAMKMTQ7Z624 323 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms