RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 FAPQ12884 760 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 ARSIQ5FYB1 569 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 SNAP47Q5SQN1 464 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 KHDRBS2Q5VWX1 349 aaKnown RBP12.53□□□□□ -0.4
VRK3-209ENST00000594948 FAM83HQ6ZRV2 1179 aaPredicted RBP12.53□□□□□ -0.4
VRK3-209ENST00000594948 ADIPOR2Q86V24 386 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 MORN4Q8NDC4 146 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 C19orf18Q8NEA5 215 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 BBS10Q8TAM1 723 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 CHFRQ96EP1 664 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 ZBED6CLQ96FA7 236 aaPredicted RBP12.53□□□□□ -0.4
VRK3-209ENST00000594948 ZNF514Q96K75 400 aaPredicted RBP12.53□□□□□ -0.4
VRK3-209ENST00000594948 LRR1Q96L50 414 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 FYTTD1Q96QD9 318 aaKnown RBP12.53□□□□□ -0.4
VRK3-209ENST00000594948 ARHGAP9Q9BRR9 750 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 FNDC11Q9BVV2 318 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 PRRG3Q9BZD7 231 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 MVB12BQ9H7P6 319 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 NT5DC2Q9H857 520 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 BCL2L10Q9HD36 194 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 DIABLOQ9NR28 239 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 PLSCR3Q9NRY6 295 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 IL36AQ9UHA7 158 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 SLC9A8Q9Y2E8 581 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 KDM4EB2RXH2 506 aaPredicted RBP12.52□□□□□ -0.41
VRK3-209ENST00000594948 SGK494L7N484 410 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 PLPP1O14494 284 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 SH3BP5O60239 455 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 SLC43A1O75387 559 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 ELFN1P0C7U0 828 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 FAM157BP0CG42 384 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 GALP22466 123 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 PPP2R1BP30154 601 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 BSGP35613 385 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 MAPK12P53778 367 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 CLDN20P56880 219 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 ARPC4P59998 168 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 CAP1Q01518 475 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 ACSM1Q08AH1 577 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 Q5BKY6 102 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 TRIQKQ629K1 86 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 ACSM5Q6NUN0 579 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 ZNF765Q7L2R6 523 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 BCDIN3DQ7Z5W3 292 aaKnown RBP12.52□□□□□ -0.41
VRK3-209ENST00000594948 ZER1Q7Z7L7 766 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 TMEM25Q86YD3 366 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 CFAP206Q8IYR0 622 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 ADGRF3Q8IZF5 1079 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 OR4K5Q8NGD3 323 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 C1GALT1C1Q96EU7 318 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 PRRC1Q96M27 445 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 GTPBP2Q9BX10 602 aaKnown RBP12.52□□□□□ -0.41
VRK3-209ENST00000594948 MS4A8Q9BY19 250 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 PITHD1Q9GZP4 211 aaPredicted RBP12.52□□□□□ -0.41
VRK3-209ENST00000594948 MAN2C1Q9NTJ4 1040 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 ADAM30Q9UKF2 790 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 ADAM29Q9UKF5 820 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 FBXW2Q9UKT8 454 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 BOLA1Q9Y3E2 137 aa12.52□□□□□ -0.41
VRK3-209ENST00000594948 DENND4AQ7Z401 1863 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 LINC00854A0A1B0GVQ3 168 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 SLC28A2O43868 658 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 B4GALT2O60909 372 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 EPHX1P07099 455 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 SLC2A2P11168 524 aaPredicted RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 ACADLP28330 430 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 IL12RB1P42701 662 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 ANXA11P50995 505 aaKnown RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 RPS26P62854 115 aaKnown RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 TRA2BP62995 288 aaKnown RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 MEF2AQ02078 507 aaPredicted RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 TSTA3Q13630 321 aaPredicted RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 EFR3AQ14156 821 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 SF3A2Q15428 464 aaKnown RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 SPDYE7PQ495Y7 208 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 CRTC2Q53ET0 693 aaPredicted RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 MZT2AQ6P582 158 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 ZNF767PQ75MW2 155 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 PRICKLE2Q7Z3G6 844 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 RBM45Q8IUH3 476 aaKnown RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 MMP21Q8N119 569 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 CAMKK1Q8N5S9 505 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 IQCF1Q8N6M8 205 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 ZNF485Q8NCK3 441 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 ATP6V1C2Q8NEY4 427 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 GNPDA2Q8TDQ7 276 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 TM9SF4Q92544 642 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 RAB8BQ92930 207 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 RNFT2Q96EX2 444 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 DTD2Q96FN9 168 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 ZFYVE19Q96K21 471 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 SLC35G5Q96KT7 338 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 MRGPRX3Q96LB0 322 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 COQ10AQ96MF6 247 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 TREX2Q9BQ50 279 aaPredicted RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 TAS2R7Q9NYW3 318 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 NDRG2Q9UN36 371 aaKnown RBP12.51□□□□□ -0.41
VRK3-209ENST00000594948 POLHQ9Y253 713 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 CKAP5Q14008 2032 aa12.51□□□□□ -0.41
VRK3-209ENST00000594948 OR6C70A6NIJ9 312 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms