RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 HPCAL1P37235 193 aa23.89■■□□□ 1.41
TRIM28-204ENST00000594806 DUSP2Q05923 314 aa23.89■■□□□ 1.41
TRIM28-204ENST00000594806 OR1C1Q15619 314 aa23.89■■□□□ 1.41
TRIM28-204ENST00000594806 NATD1Q8N6N6 113 aa23.89■■□□□ 1.41
TRIM28-204ENST00000594806 ZNF615Q8N8J6 731 aa23.89■■□□□ 1.41
TRIM28-204ENST00000594806 MDS2Q8NDY4 140 aa23.89■■□□□ 1.41
TRIM28-204ENST00000594806 C17orf47Q8NEP4 570 aa23.89■■□□□ 1.41
TRIM28-204ENST00000594806 TP53INP1Q96A56 240 aa23.89■■□□□ 1.41
TRIM28-204ENST00000594806 EPN3Q9H201 632 aa23.89■■□□□ 1.41
TRIM28-204ENST00000594806 MED4Q9NPJ6 270 aa23.89■■□□□ 1.41
TRIM28-204ENST00000594806 LRFN1Q9P244 771 aa23.89■■□□□ 1.41
TRIM28-204ENST00000594806 GIMAP2Q9UG22 337 aa23.89■■□□□ 1.41
TRIM28-204ENST00000594806 OR2J2O76002 312 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 CLPSP04118 112 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 CD46P15529 392 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 PRPS1L1P21108 318 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 EBPQ15125 230 aaKnown RBP23.88■■□□□ 1.41
TRIM28-204ENST00000594806 ZNF628Q5EBL2 1059 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 PIGGQ5H8A4 983 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 HLA-DQA1Q5Y7H0 255 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 OGFOD2Q6N063 350 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 FAM180BQ6P0A1 224 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 FAM111BQ6SJ93 734 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 WDR75Q8IWA0 830 aaKnown RBP23.88■■□□□ 1.41
TRIM28-204ENST00000594806 SLC22A8Q8TCC7 542 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 ASB15Q8WXK1 588 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 GFM2Q969S9 779 aaKnown RBP23.88■■□□□ 1.41
TRIM28-204ENST00000594806 RASL10BQ96S79 203 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 PRPF18Q99633 342 aaKnown RBP23.88■■□□□ 1.41
TRIM28-204ENST00000594806 C1orf50Q9BV19 199 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 WWTR1Q9GZV5 400 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 PRODH2Q9UF12 536 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 ATP6V1HQ9UI12 483 aa23.88■■□□□ 1.41
TRIM28-204ENST00000594806 CFAP46Q8IYW2 2715 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 C2orf92A0A1B0GVN3 265 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 WWP2O00308 870 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 PLOD3O60568 738 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 F10P00742 488 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 NCBP2P52298 156 aaKnown RBP eCLIP23.87■■□□□ 1.41
TRIM28-204ENST00000594806 C21orf58P58505 322 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 ZNF766Q5HY98 468 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 OPN5Q6U736 354 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 LARP4Q71RC2 724 aaKnown RBP eCLIP23.87■■□□□ 1.41
TRIM28-204ENST00000594806 DND1Q8IYX4 353 aaKnown RBP23.87■■□□□ 1.41
TRIM28-204ENST00000594806 ARFGAP2Q8N6H7 521 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 TMEM178AQ8NBL3 297 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 ADCY4Q8NFM4 1077 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 ZFP28Q8NHY6 868 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 DOK4Q8TEW6 326 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 TMEM125Q96AQ2 219 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 PPP1R36Q96LQ0 422 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 MAGEB18Q96M61 343 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 C5orf34Q96MH7 638 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 SH3BP4Q9P0V3 963 aa23.87■■□□□ 1.41
TRIM28-204ENST00000594806 A0A087WV62 115 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 A8MVJ9 347 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 SCAMP2O15127 329 aaKnown RBP23.86■■□□□ 1.41
TRIM28-204ENST00000594806 PDPK1O15530 556 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 AKAP10O43572 662 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 NEURL1O76050 574 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 LRATO95237 230 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 KITP10721 976 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 DCAF7P61962 342 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 TAGAPQ8N103 731 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 OR9A2Q8NGT5 310 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 CLHC1Q8NHS4 586 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 CKAP2Q8WWK9 683 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 ZBED6CLQ96FA7 236 aaPredicted RBP23.86■■□□□ 1.41
TRIM28-204ENST00000594806 SCMH1Q96GD3 660 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 SIGLEC12Q96PQ1 595 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 GAL3ST4Q96RP7 486 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 LIN28AQ9H9Z2 209 aaKnown RBP23.86■■□□□ 1.41
TRIM28-204ENST00000594806 ACSS1Q9NUB1 689 aaPredicted RBP23.86■■□□□ 1.41
TRIM28-204ENST00000594806 ATAD3AQ9NVI7 634 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 HPF1Q9NWY4 346 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 ANKRD10Q9NXR5 420 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 LUZP4Q9P127 313 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 MARCOQ9UEW3 520 aaPredicted RBP23.86■■□□□ 1.41
TRIM28-204ENST00000594806 BCAP29Q9UHQ4 241 aa23.86■■□□□ 1.41
TRIM28-204ENST00000594806 PLOD2O00469 737 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 SDHDO14521 159 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 G6PDP11413 515 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 FRKP42685 505 aaPredicted RBP23.85■■□□□ 1.41
TRIM28-204ENST00000594806 CLDN8P56748 225 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 TLE1Q04724 770 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 PTGR1Q14914 329 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 LTB4RQ15722 352 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 INPP5JQ15735 1006 aaPredicted RBP23.85■■□□□ 1.41
TRIM28-204ENST00000594806 PRSS53Q2L4Q9 553 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 TRMT12Q53H54 448 aaKnown RBP23.85■■□□□ 1.41
TRIM28-204ENST00000594806 ZNF468Q5VIY5 522 aaPredicted RBP23.85■■□□□ 1.41
TRIM28-204ENST00000594806 SPINK14Q6IE38 97 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 SLC25A25Q6KCM7 469 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 RGS9BPQ6ZS82 235 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 SPATA19Q7Z5L4 167 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 CYP4Z2PQ8N1L4 340 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 ZNF441Q8N8Z8 693 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 C16orf52Q8NHV5 167 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 CPT1CQ8TCG5 803 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 SGCZQ96LD1 299 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms