RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 NRTNQ99748 197 aa14.59□□□□□ -0.07
PNKP-204ENST00000594661 MYOCQ99972 504 aa14.59□□□□□ -0.07
PNKP-204ENST00000594661 SGPP1Q9BX95 441 aa14.59□□□□□ -0.07
PNKP-204ENST00000594661 SRRQ9GZT4 340 aa14.59□□□□□ -0.07
PNKP-204ENST00000594661 TMEM168Q9H0V1 697 aa14.59□□□□□ -0.07
PNKP-204ENST00000594661 ING3Q9NXR8 418 aa14.59□□□□□ -0.07
PNKP-204ENST00000594661 VPS29Q9UBQ0 182 aa14.59□□□□□ -0.07
PNKP-204ENST00000594661 AASSQ9UDR5 926 aa14.59□□□□□ -0.07
PNKP-204ENST00000594661 CFAP20Q9Y6A4 193 aaKnown RBP14.59□□□□□ -0.07
PNKP-204ENST00000594661 ZNF98A6NK75 572 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 H0YIV9 168 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 GNGT2O14610 69 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 ACPPP15309 386 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 NPPBP16860 134 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 DRD1P21728 446 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 PRKACGP22612 351 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 EVI2BP34910 448 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 SMN1Q16637 294 aaKnown RBP14.58□□□□□ -0.08
PNKP-204ENST00000594661 SLC35F1Q5T1Q4 408 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 LRIF1Q5T3J3 769 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 METRNLQ641Q3 311 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 SLCO4C1Q6ZQN7 724 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 FAM124AQ86V42 546 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 SYT12Q8IV01 421 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 ZNF680Q8NEM1 530 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 FBXO30Q8TB52 745 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 AKAP1Q92667 903 aaKnown RBP eCLIP14.58□□□□□ -0.08
PNKP-204ENST00000594661 FAM162AQ96A26 154 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 GABARAPL1Q9H0R8 117 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 PRO3102Q9H379 93 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 RNF167Q9H6Y7 350 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 FBRSQ9HAH7 460 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 SGK2Q9HBY8 427 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 SMURF1Q9HCE7 757 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 PHPT1Q9NRX4 125 aaPredicted RBP14.58□□□□□ -0.08
PNKP-204ENST00000594661 CPNE7Q9UBL6 633 aa14.58□□□□□ -0.08
PNKP-204ENST00000594661 TBC1D3DA0A087WVF3 549 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 TBC1D3IA0A087WXS9 549 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 TBC1D3EA0A087X179 549 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 TBC1D3KA0A087X1G2 549 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 SLC35F4A4IF30 521 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 TBC1D3FA6NER0 549 aaPredicted RBP14.57□□□□□ -0.08
PNKP-204ENST00000594661 TBC1D3LB9A6J9 549 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 BTN3A3O00478 584 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 CXCR6O00574 342 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 RGS5O15539 181 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 LATO43561 262 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 PTP4A3O75365 173 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 TBC1D3HP0C7X1 549 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 CD72P21854 359 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 KELP23276 732 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 GBX2P52951 348 aaPredicted RBP14.57□□□□□ -0.08
PNKP-204ENST00000594661 PNLIPRP1P54315 467 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 CSNK2BP67870 215 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 LAPTM5Q13571 262 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 GPR19Q15760 415 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 FBXO43Q4G163 708 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 ATG9BQ674R7 924 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 TBC1D3GQ6DHY5 549 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 OR4F3Q6IEY1 312 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 TBC1D3CQ6IPX1 549 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 ENPP6Q6UWR7 440 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 ZNF600Q6ZNG1 722 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 TBC1D3Q8IZP1 549 aaPredicted RBP14.57□□□□□ -0.08
PNKP-204ENST00000594661 CYP4Z2PQ8N1L4 340 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 TFGQ92734 400 aaPredicted RBP14.57□□□□□ -0.08
PNKP-204ENST00000594661 PTP4A1Q93096 173 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 FAM120BQ96EK7 910 aaKnown RBP14.57□□□□□ -0.08
PNKP-204ENST00000594661 SIPA1Q96FS4 1042 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 KLHL15Q96M94 604 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 WDFY2Q96P53 400 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 CPPED1Q9BRF8 314 aaPredicted RBP14.57□□□□□ -0.08
PNKP-204ENST00000594661 OR51E2Q9H255 320 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 OR51B5Q9H339 312 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 IFT46Q9NQC8 304 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 GPRC5BQ9NZH0 403 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 SCML1Q9UN30 329 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 LOC100506127A0A0U1RQW1 187 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 ETHE1O95571 254 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 ASGR2P07307 311 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 ACP5P13686 325 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 PCSK2P16519 638 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 PRPS1L1P21108 318 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 IGFBP5P24593 272 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 CDKN2CP42773 168 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 KIR3DL1P43629 444 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 TPMTP51580 245 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 ZNF273Q14593 569 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 QPRTQ15274 297 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 CLLU1Q5K131 121 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 PAMR1Q6UXH9 720 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 TMEM92Q6UXU6 159 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 AHSA2Q719I0 299 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 PHC2Q8IXK0 858 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 C2orf73Q8N5S3 287 aaPredicted RBP14.57□□□□□ -0.08
PNKP-204ENST00000594661 OR7G3Q8NG95 312 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 RPLP0P6Q8NHW5 317 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 CDC26Q8NHZ8 85 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 UFD1Q92890 307 aa14.57□□□□□ -0.08
PNKP-204ENST00000594661 SLC47A1Q96FL8 570 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms