RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 SCRG1O75711 98 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 SLC35E2P0CK97 266 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 ACADSP16219 412 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 HOXB6P17509 224 aaKnown RBP14.22□□□□□ -0.13
VRK3-207ENST00000594092 PCGF2P35227 344 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 PRIM2P49643 509 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 DSTNP60981 165 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 IGLV3-21P80748 117 aaPredicted RBP14.22□□□□□ -0.13
VRK3-207ENST00000594092 MRPS35P82673 323 aaKnown RBP14.22□□□□□ -0.13
VRK3-207ENST00000594092 PRR5P85299 388 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 ZNF628Q5EBL2 1059 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 HMBOX1Q6NT76 420 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 BHLHB9Q6PI77 547 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 CEACAM20Q6UY09 585 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 RBM44Q6ZP01 1051 aaKnown RBP14.22□□□□□ -0.13
VRK3-207ENST00000594092 MED25Q71SY5 747 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 AMIGO2Q86SJ2 522 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 PPP1R3BQ86XI6 285 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 EID3Q8N140 333 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 BMPERQ8N8U9 685 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 SLC38A9Q8NBW4 561 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 C11orf65Q8NCR3 313 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 EME1Q96AY2 570 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 OR1F2PQ96R84 312 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 YIPF2Q9BWQ6 316 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 VCXQ9H320 206 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 AGPAT4Q9NRZ5 378 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 NTMQ9P121 344 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 TRPC4Q9UBN4 977 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 SAMD4AQ9UPU9 718 aaKnown RBP14.22□□□□□ -0.13
VRK3-207ENST00000594092 FER1L5A0AVI2 2057 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 UPK1AO00322 258 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 CAPNS1P04632 268 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 HMGN2P05204 90 aaKnown RBP14.22□□□□□ -0.13
VRK3-207ENST00000594092 ARAFP10398 606 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 CCKBRP32239 447 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 HSD17B7P56937 341 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 EEF1A2Q05639 463 aaKnown RBP14.22□□□□□ -0.13
VRK3-207ENST00000594092 RBBP4Q09028 425 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 STX4Q12846 297 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 LRRC23Q53EV4 343 aaPredicted RBP14.22□□□□□ -0.13
VRK3-207ENST00000594092 CCDC157Q569K6 752 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 ARHGAP40Q5TG30 622 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 ENPP6Q6UWR7 440 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 NUP43Q8NFH3 380 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 SLC47A1Q96FL8 570 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 CHID1Q9BWS9 393 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 ASPSCR1Q9BZE9 553 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 SLC7A5P2Q9GIP4 190 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 IRF2BPLQ9H1B7 796 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 PTGFRNQ9P2B2 879 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 RPS6KA6Q9UK32 745 aa14.22□□□□□ -0.13
VRK3-207ENST00000594092 EP300Q09472 2414 aaPredicted RBP14.22□□□□□ -0.13
VRK3-207ENST00000594092 MUC6Q6W4X9 2439 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 HMGN4O00479 90 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 PRKD3O94806 890 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 BMP10O95393 424 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 FGF5P12034 268 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 MAOAP21397 527 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 NT5EP21589 574 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 MATN1P21941 496 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 KDELR2P33947 212 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 MGAT2Q10469 447 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 ILKQ13418 452 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 IL11RAQ14626 422 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 PRICKLE4Q2TBC4 344 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 TRMT12Q53H54 448 aaKnown RBP14.21□□□□□ -0.13
VRK3-207ENST00000594092 CMPK2Q5EBM0 449 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 FHL5Q5TD97 284 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 FAM111BQ6SJ93 734 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 BPHLQ86WA6 291 aaPredicted RBP14.21□□□□□ -0.13
VRK3-207ENST00000594092 OR2L13Q8N349 312 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 ANKFN1Q8N957 763 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 ICA1LQ8NDH6 482 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 ZNF675Q8TD23 568 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 DOK4Q8TEW6 326 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 GIMAP5Q96F15 307 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 ALOXE3Q9BYJ1 711 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 OR51I1Q9H343 314 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 MAGIXQ9H6Y5 334 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 DDX18Q9NVP1 670 aaKnown RBP14.21□□□□□ -0.13
VRK3-207ENST00000594092 MAT2BQ9NZL9 334 aa14.21□□□□□ -0.13
VRK3-207ENST00000594092 OR10H2O60403 315 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 RFPL3O75679 317 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 SLITRK5O94991 958 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 CT62P0C5K7 136 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 CCL4P13236 92 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 ATP6V1C1P21283 382 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 MAGEA8P43361 318 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 CDK6Q00534 326 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 E2F1Q01094 437 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 SCARB2Q14108 478 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 LASP1Q14847 261 aaKnown RBP14.2□□□□□ -0.14
VRK3-207ENST00000594092 ZNF630Q2M218 657 aaPredicted RBP14.2□□□□□ -0.14
VRK3-207ENST00000594092 SFT2D3Q587I9 215 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 DGAT2L6Q6ZPD8 337 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 COX15Q7KZN9 410 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 ZC3H7AQ8IWR0 971 aaKnown RBP14.2□□□□□ -0.14
VRK3-207ENST00000594092 ST13P4Q8IZP2 240 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms