RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 C15orf41Q9Y2V0 281 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 RNF11Q9Y3C5 154 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 IKBKGQ9Y6K9 419 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 AKAP6Q13023 2319 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 FAM187AA6NFU0 413 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 CAPN14A8MX76 684 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 GFAPP14136 432 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 BMP7P18075 431 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 CASP3P42574 277 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 DGKQP52824 942 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 ADAM8P78325 824 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 FUT7Q11130 342 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 GTF2H2Q13888 395 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 DAZAP2Q15038 168 aaPredicted RBP14.95□□□□□ -0.02
LIG1-205ENST00000593425 EIPR1Q53HC9 387 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 WIPI1Q5MNZ9 446 aaPredicted RBP14.95□□□□□ -0.02
LIG1-205ENST00000593425 GTF2H2CQ6P1K8 395 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 GOLGA7Q7Z5G4 137 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 GALNT12Q8IXK2 581 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 PM20D2Q8IYS1 436 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 MMP21Q8N119 569 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 ZNF615Q8N8J6 731 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 RHEBL1Q8TAI7 183 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 NTNG2Q96CW9 530 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 REPS1Q96D71 796 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 WDYHV1Q96HA8 205 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 TRIB1Q96RU8 372 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 OR10A5Q9H207 317 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 FOXD3Q9UJU5 478 aaPredicted RBP14.95□□□□□ -0.02
LIG1-205ENST00000593425 DTX4Q9Y2E6 619 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 RPH3AQ9Y2J0 694 aaPredicted RBP14.95□□□□□ -0.02
LIG1-205ENST00000593425 ACOT9Q9Y305 439 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 DOCK7Q96N67 2140 aa14.95□□□□□ -0.02
LIG1-205ENST00000593425 MBD3L4A6NDZ8 208 aaPredicted RBP14.94□□□□□ -0.02
LIG1-205ENST00000593425 MBD3L3A6NE82 208 aaPredicted RBP14.94□□□□□ -0.02
LIG1-205ENST00000593425 TUBAL3A6NHL2 446 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 MBD3L5A6NJ08 208 aaPredicted RBP14.94□□□□□ -0.02
LIG1-205ENST00000593425 SYCE1LA8MT33 242 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 GNB5O14775 395 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 UGDHO60701 494 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 SNX4O95219 450 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 ATE1O95260 518 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 SIX3O95343 332 aaPredicted RBP14.94□□□□□ -0.02
LIG1-205ENST00000593425 C2P06681 752 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 PIK3R1P27986 724 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 SOX18P35713 384 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 TMED10P49755 219 aaKnown RBP14.94□□□□□ -0.02
LIG1-205ENST00000593425 ALDH18A1P54886 795 aaKnown RBP14.94□□□□□ -0.02
LIG1-205ENST00000593425 C2orf54Q08AI8 447 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 PCBP2Q15366 365 aaKnown RBP eCLIP14.94□□□□□ -0.02
LIG1-205ENST00000593425 TOMM20Q15388 145 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 NHSL2Q5HYW2 709 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 HLA-DQA1Q5Y7H0 255 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 DESI1Q6ICB0 168 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 PACS2Q86VP3 889 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 CCDC25Q86WR0 208 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 L3MBTL4Q8NA19 623 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 MBD3L2Q8NHZ7 208 aaPredicted RBP14.94□□□□□ -0.02
LIG1-205ENST00000593425 LINC01560Q8TB33 94 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 MBD6Q96DN6 1003 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 TMEM41AQ96HV5 264 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 CDK15Q96Q40 435 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 SECISBP2Q96T21 854 aaKnown RBP14.94□□□□□ -0.02
LIG1-205ENST00000593425 IPPKQ9H8X2 491 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 RNF14Q9UBS8 474 aa14.94□□□□□ -0.02
LIG1-205ENST00000593425 A0A087X1B8 175 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 HMX2A2RU54 273 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 CD8B2A6NJW9 211 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 EEF1E1-BLOC1S5C9J1V9 151 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 EEF1E1O43324 174 aaKnown RBP14.93□□□□□ -0.02
LIG1-205ENST00000593425 RAF1P04049 648 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 EPXP11678 715 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 GPX3P22352 226 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 ABCD3P28288 659 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 PTPN6P29350 595 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 STX2P32856 288 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 MAGEA4P43358 317 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 PLTPP55058 493 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 TRADDQ15628 312 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 NNATQ16517 81 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 CAMKMTQ7Z624 323 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 C9orf106Q8NAJ2 232 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 SPATA4Q8NEY3 305 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 FBXO25Q8TCJ0 367 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 NXF5Q9H1B4 397 aaKnown RBP14.93□□□□□ -0.02
LIG1-205ENST00000593425 PSD3Q9NYI0 1048 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 JKAMPQ9P055 326 aa14.93□□□□□ -0.02
LIG1-205ENST00000593425 CPSF2Q9P2I0 782 aaKnown RBP14.93□□□□□ -0.02
LIG1-205ENST00000593425 ANKHD1Q8IWZ3 2542 aaKnown RBP14.93□□□□□ -0.02
LIG1-205ENST00000593425 FOXE1O00358 373 aaPredicted RBP14.92□□□□□ -0.02
LIG1-205ENST00000593425 OR7A17O14581 309 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 SEMA3DO95025 777 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 ABCB1P08183 1280 aaPredicted RBP14.92□□□□□ -0.02
LIG1-205ENST00000593425 S1PR1P21453 382 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 NT5EP21589 574 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 CTSSP25774 331 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 SLCO1A2P46721 670 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 NAGLUP54802 743 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 NRG3P56975 720 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 NAB1Q13506 487 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms