RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 MASP1P48740 699 aa18.76■□□□□ 0.59
TRIM47-207ENST00000593089 XKP51811 444 aa18.76■□□□□ 0.59
TRIM47-207ENST00000593089 NRG3P56975 720 aa18.76■□□□□ 0.59
TRIM47-207ENST00000593089 FUT7Q11130 342 aa18.76■□□□□ 0.59
TRIM47-207ENST00000593089 HSPB2Q16082 182 aa18.76■□□□□ 0.59
TRIM47-207ENST00000593089 SGO1Q5FBB7 561 aa18.76■□□□□ 0.59
TRIM47-207ENST00000593089 CCNYL2Q5T2Q4 361 aa18.76■□□□□ 0.59
TRIM47-207ENST00000593089 C6orf163Q5TEZ5 329 aa18.76■□□□□ 0.59
TRIM47-207ENST00000593089 ZNF615Q8N8J6 731 aa18.76■□□□□ 0.59
TRIM47-207ENST00000593089 TNIP2Q8NFZ5 429 aa18.76■□□□□ 0.59
TRIM47-207ENST00000593089 NTMT1Q9BV86 223 aa18.76■□□□□ 0.59
TRIM47-207ENST00000593089 ZBTB26Q9HCK0 441 aa18.76■□□□□ 0.59
TRIM47-207ENST00000593089 DNAJB12Q9NXW2 375 aaKnown RBP18.76■□□□□ 0.59
TRIM47-207ENST00000593089 PCTPQ9UKL6 214 aa18.76■□□□□ 0.59
TRIM47-207ENST00000593089 SPG11Q96JI7 2443 aa18.76■□□□□ 0.59
TRIM47-207ENST00000593089 ACSL3O95573 720 aa18.75■□□□□ 0.59
TRIM47-207ENST00000593089 RBP1P09455 135 aa18.75■□□□□ 0.59
TRIM47-207ENST00000593089 CPMP14384 443 aa18.75■□□□□ 0.59
TRIM47-207ENST00000593089 BMP5P22003 454 aa18.75■□□□□ 0.59
TRIM47-207ENST00000593089 TMED10P49755 219 aaKnown RBP18.75■□□□□ 0.59
TRIM47-207ENST00000593089 CRYZQ08257 329 aaKnown RBP18.75■□□□□ 0.59
TRIM47-207ENST00000593089 IFT88Q13099 833 aa18.75■□□□□ 0.59
TRIM47-207ENST00000593089 TRAF3Q13114 568 aa18.75■□□□□ 0.59
TRIM47-207ENST00000593089 ACSF3Q4G176 576 aaPredicted RBP18.75■□□□□ 0.59
TRIM47-207ENST00000593089 PACS2Q86VP3 889 aa18.75■□□□□ 0.59
TRIM47-207ENST00000593089 RELL2Q8NC24 303 aaPredicted RBP18.75■□□□□ 0.59
TRIM47-207ENST00000593089 NAXEQ8NCW5 288 aa18.75■□□□□ 0.59
TRIM47-207ENST00000593089 ADIPOR1Q96A54 375 aa18.75■□□□□ 0.59
TRIM47-207ENST00000593089 GNRHR2Q96P88 292 aa18.75■□□□□ 0.59
TRIM47-207ENST00000593089 TIMP4Q99727 224 aa18.75■□□□□ 0.59
TRIM47-207ENST00000593089 ANGPTL4Q9BY76 406 aa18.75■□□□□ 0.59
TRIM47-207ENST00000593089 AHSPQ9NZD4 102 aa18.75■□□□□ 0.59
TRIM47-207ENST00000593089 XPR1Q9UBH6 696 aa18.75■□□□□ 0.59
TRIM47-207ENST00000593089 SLC6A5Q9Y345 797 aa18.75■□□□□ 0.59
TRIM47-207ENST00000593089 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.75■□□□□ 0.59
TRIM47-207ENST00000593089 AHRRA9YTQ3 701 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 STX16-NPEPL1H3BU86 382 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 STX16O14662 325 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 SMIM24O75264 130 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 CTAG2O75638 210 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 SNX4O95219 450 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 EPPINO95925 133 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 INHBAP08476 426 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 CASP3P42574 277 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 KIR2DL3P43628 341 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 IST1P53990 364 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 RPP38P78345 283 aaKnown RBP18.74■□□□□ 0.59
TRIM47-207ENST00000593089 TOMM20Q15388 145 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 FNDC7Q5VTL7 733 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 RPS27LQ71UM5 84 aaKnown RBP18.74■□□□□ 0.59
TRIM47-207ENST00000593089 PAGE2Q7Z2X7 111 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 MILR1Q7Z6M3 343 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 OR4F6Q8NGB9 312 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 SECISBP2Q96T21 854 aaKnown RBP18.74■□□□□ 0.59
TRIM47-207ENST00000593089 POLDIP3Q9BY77 421 aaKnown RBP18.74■□□□□ 0.59
TRIM47-207ENST00000593089 BRINP2Q9C0B6 783 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 ELOVL6Q9H5J4 265 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 ADAM29Q9UKF5 820 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 TMCO1Q9UM00 188 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 DTX4Q9Y2E6 619 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 C15orf41Q9Y2V0 281 aa18.74■□□□□ 0.59
TRIM47-207ENST00000593089 DVL2O14641 736 aa18.73■□□□□ 0.59
TRIM47-207ENST00000593089 GNB5O14775 395 aa18.73■□□□□ 0.59
TRIM47-207ENST00000593089 HPNP05981 417 aa18.73■□□□□ 0.59
TRIM47-207ENST00000593089 PORP16435 677 aaPredicted RBP18.73■□□□□ 0.59
TRIM47-207ENST00000593089 KRT15P19012 456 aa18.73■□□□□ 0.59
TRIM47-207ENST00000593089 GPX3P22352 226 aa18.73■□□□□ 0.59
TRIM47-207ENST00000593089 ABCD3P28288 659 aa18.73■□□□□ 0.59
TRIM47-207ENST00000593089 MAGEA12P43365 314 aa18.73■□□□□ 0.59
TRIM47-207ENST00000593089 CDK9P50750 372 aaKnown RBP18.73■□□□□ 0.59
TRIM47-207ENST00000593089 MAPK12P53778 367 aa18.73■□□□□ 0.59
TRIM47-207ENST00000593089 CKAP4Q07065 602 aaKnown RBP18.73■□□□□ 0.59
TRIM47-207ENST00000593089 NNATQ16517 81 aa18.73■□□□□ 0.59
TRIM47-207ENST00000593089 METTL4Q8N3J2 472 aa18.73■□□□□ 0.59
TRIM47-207ENST00000593089 OR7G1Q8NGA0 311 aa18.73■□□□□ 0.59
TRIM47-207ENST00000593089 SLC44A1Q8WWI5 657 aa18.73■□□□□ 0.59
TRIM47-207ENST00000593089 GPATCH1Q9BRR8 931 aaKnown RBP18.73■□□□□ 0.59
TRIM47-207ENST00000593089 NXF5Q9H1B4 397 aaKnown RBP18.73■□□□□ 0.59
TRIM47-207ENST00000593089 UBQLN3Q9H347 655 aa18.73■□□□□ 0.59
TRIM47-207ENST00000593089 CDC42EP4Q9H3Q1 356 aaKnown RBP18.73■□□□□ 0.59
TRIM47-207ENST00000593089 FARSBQ9NSD9 589 aaKnown RBP18.73■□□□□ 0.59
TRIM47-207ENST00000593089 CRIM1Q9NZV1 1036 aa18.73■□□□□ 0.59
TRIM47-207ENST00000593089 SLC12A4Q9UP95 1085 aa18.73■□□□□ 0.59
TRIM47-207ENST00000593089 CAMK2AQ9UQM7 478 aa18.73■□□□□ 0.59
TRIM47-207ENST00000593089 KIAA1549Q9HCM3 1950 aa18.72■□□□□ 0.59
TRIM47-207ENST00000593089 A0A1B0GTL3 188 aa18.72■□□□□ 0.59
TRIM47-207ENST00000593089 SYT5O00445 386 aa18.72■□□□□ 0.59
TRIM47-207ENST00000593089 ERAL1O75616 437 aaKnown RBP18.72■□□□□ 0.59
TRIM47-207ENST00000593089 S1PR1P21453 382 aa18.72■□□□□ 0.59
TRIM47-207ENST00000593089 CEACAM8P31997 349 aaPredicted RBP18.72■□□□□ 0.59
TRIM47-207ENST00000593089 DEKP35659 375 aaKnown RBP18.72■□□□□ 0.59
TRIM47-207ENST00000593089 FEN1P39748 380 aaKnown RBP18.72■□□□□ 0.59
TRIM47-207ENST00000593089 ASCL1P50553 236 aa18.72■□□□□ 0.59
TRIM47-207ENST00000593089 TSNAXIP1Q2TAA8 658 aa18.72■□□□□ 0.59
TRIM47-207ENST00000593089 GGTA1PQ4G0N0 100 aa18.72■□□□□ 0.59
TRIM47-207ENST00000593089 EIPR1Q53HC9 387 aa18.72■□□□□ 0.59
TRIM47-207ENST00000593089 C10orf62Q5T681 223 aaPredicted RBP18.72■□□□□ 0.59
TRIM47-207ENST00000593089 FAM219BQ5XKK7 198 aa18.72■□□□□ 0.59
TRIM47-207ENST00000593089 SLC48A1Q6P1K1 146 aa18.72■□□□□ 0.59
TRIM47-207ENST00000593089 FAM111BQ6SJ93 734 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms