RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 EHD3Q9NZN3 535 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 HEY2Q9UBP5 337 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 PRODH2Q9UF12 536 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 NPIPA1Q9UND3 350 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 OSGIN2Q9Y236 505 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 PTGDR2Q9Y5Y4 395 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 NUP210LQ5VU65 1888 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 ICE1Q9Y2F5 2266 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 TMEM200CA6NKL6 621 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 TMEM233B4DJY2 109 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 ACOT7O00154 380 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 TP53I11O14683 189 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 TFECO14948 347 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-227ENST00000591849 AKAP10O43572 662 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 PEX11AO75192 247 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 SKAP2O75563 359 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-227ENST00000591849 BCAS2O75934 225 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-227ENST00000591849 UNC5CO95185 931 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 ATP1B1P05026 303 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 CT62P0C5K7 136 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 ZNF24P17028 368 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 CNR1P21554 472 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 BGNP21810 368 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 PTGER1P34995 402 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 ETV4P43268 484 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 SLC1A6P48664 564 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 NCBP2P52298 156 aaKnown RBP eCLIP9.32□□□□□ -0.925e-10■■■■■ 33.9
BRCA1-227ENST00000591849 CASP6P55212 293 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 KCNK10P57789 538 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 GPR85P60893 370 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 ABCE1P61221 599 aaKnown RBP9.32□□□□□ -0.92
BRCA1-227ENST00000591849 MAGOHP61326 146 aaKnown RBP9.32□□□□□ -0.92
BRCA1-227ENST00000591849 RPP38P78345 283 aaKnown RBP9.32□□□□□ -0.92
BRCA1-227ENST00000591849 SRSF1Q07955 248 aaKnown RBP eCLIP9.32□□□□□ -0.92
BRCA1-227ENST00000591849 FUT7Q11130 342 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 MAP4K2Q12851 820 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 CASP8Q14790 479 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 EXOSC7Q15024 291 aaKnown RBP9.32□□□□□ -0.92
BRCA1-227ENST00000591849 LTB4RQ15722 352 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 KRTCAP3Q53RY4 240 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 SLC22A10Q63ZE4 541 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 FAM71E1Q6IPT2 247 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 FAM47EQ6ZV65 393 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 IKBIPQ70UQ0 350 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 MDGA2Q7Z553 956 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 KIRREL3Q8IZU9 778 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 CPSF7Q8N684 471 aaKnown RBP9.32□□□□□ -0.92
BRCA1-227ENST00000591849 PSD4Q8NDX1 1056 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 OR5M3Q8NGP4 307 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 KAT2AQ92830 837 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 GFM2Q969S9 779 aaKnown RBP9.32□□□□□ -0.92
BRCA1-227ENST00000591849 TP53INP1Q96A56 240 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 TUBGCP3Q96CW5 907 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 MAGED4Q96JG8 741 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 CCT7Q99832 543 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 TSPAN10Q9H1Z9 355 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-227ENST00000591849 SACM1LQ9NTJ5 587 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 RYDENQ9NUL5 291 aaKnown RBP9.32□□□□□ -0.92
BRCA1-227ENST00000591849 ZDHHC2Q9UIJ5 367 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 TMED5Q9Y3A6 229 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 DNAJC15Q9Y5T4 150 aa9.32□□□□□ -0.92
BRCA1-227ENST00000591849 TMEM120BA0PK00 339 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 G3V3Y1 287 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 ITM2AO43736 263 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 CDC40O60508 579 aaKnown RBP eCLIP9.31□□□□□ -0.92
BRCA1-227ENST00000591849 LYPLA1O75608 230 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-227ENST00000591849 SNUPNO95149 360 aaKnown RBP9.31□□□□□ -0.92
BRCA1-227ENST00000591849 LRATO95237 230 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 JUNP05412 331 aaKnown RBP9.31□□□□□ -0.92
BRCA1-227ENST00000591849 PCSK2P16519 638 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 PRPH2P23942 346 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 MST1P26927 711 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 KRT20P35900 424 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 RFC3P40938 356 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 ASMTP46597 345 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 TMED10P49755 219 aaKnown RBP9.31□□□□□ -0.92
BRCA1-227ENST00000591849 DCAF7P61962 342 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 EBPQ15125 230 aaKnown RBP9.31□□□□□ -0.92
BRCA1-227ENST00000591849 PRICKLE4Q2TBC4 344 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 TRMT12Q53H54 448 aaKnown RBP9.31□□□□□ -0.92
BRCA1-227ENST00000591849 ATG16L1Q676U5 607 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 PAOXQ6QHF9 649 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 GK5Q6ZS86 529 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 Q6ZSR9 355 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 R3HCC1LQ7Z5L2 792 aaKnown RBP9.31□□□□□ -0.92
BRCA1-227ENST00000591849 TRIM42Q8IWZ5 723 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 DND1Q8IYX4 353 aaKnown RBP9.31□□□□□ -0.92
BRCA1-227ENST00000591849 FNDC5Q8NAU1 212 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 GOLM1Q8NBJ4 401 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 OR52R1Q8NGF1 315 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 OR9A2Q8NGT5 310 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 OR2T11Q8NH01 316 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 ZFP28Q8NHY6 868 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 PPCDCQ96CD2 204 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 SPACA9Q96E40 222 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-227ENST00000591849 CNRIP1Q96F85 164 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-227ENST00000591849 TSSK3Q96PN8 268 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 BARD1Q99728 777 aaKnown RBP9.31□□□□□ -0.92
BRCA1-227ENST00000591849 SLX1AQ9BQ83 275 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 FAM173AQ9BQD7 235 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms