RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 LNPEPQ9UIQ6 1025 aa3.19□□□□□ -1.9
VMP1-212ENST00000591782 PLCL2Q9UPR0 1127 aa3.19□□□□□ -1.9
VMP1-212ENST00000591782 HYOU1Q9Y4L1 999 aa3.19□□□□□ -1.9
VMP1-212ENST00000591782 HEY1Q9Y5J3 304 aa3.19□□□□□ -1.9
VMP1-212ENST00000591782 CPDO75976 1380 aa3.19□□□□□ -1.9
VMP1-212ENST00000591782 TCOF1Q13428 1488 aaKnown RBP3.19□□□□□ -1.9
VMP1-212ENST00000591782 NLRP1Q9C000 1473 aa3.19□□□□□ -1.9
VMP1-212ENST00000591782 TAF1LQ8IZX4 1826 aa3.19□□□□□ -1.9
VMP1-212ENST00000591782 CHD1O14646 1710 aa3.19□□□□□ -1.9
VMP1-212ENST00000591782 POGZQ7Z3K3 1410 aa3.19□□□□□ -1.9
VMP1-212ENST00000591782 ADCY9O60503 1353 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 TNRQ92752 1358 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 ANKRD30BQ9BXX2 1392 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 MED19A0JLT2 244 aaPredicted RBP3.18□□□□□ -1.9
VMP1-212ENST00000591782 DUXAA6NLW8 204 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 PMS2P5A8MQ11 134 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 FAM86B1E9PN63 330 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 MEIS2O14770 477 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 XRCC3O43542 346 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 PRAMEF11O60813 436 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 MTX2O75431 263 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 CBR3O75828 277 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 CCNKO75909 580 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 PLEKHA8P1O95397 391 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 PIGNO95427 931 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 TSHBP01222 138 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 CALCAP01258 141 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 FAM86B2P0C5J1 330 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 GNAZP19086 355 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 TNNI1P19237 187 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 TCN1P20061 433 aaPredicted RBP3.18□□□□□ -1.9
VMP1-212ENST00000591782 IL11P20809 199 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 TCEA1P23193 301 aaKnown RBP3.18□□□□□ -1.9
VMP1-212ENST00000591782 PSMA5P28066 241 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 SERPINB1P30740 379 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 FEN1P39748 380 aaKnown RBP3.18□□□□□ -1.9
VMP1-212ENST00000591782 CASP4P49662 377 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 SERPINB9P50453 376 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 STARD6P59095 220 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 AP1S1P61966 158 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 RPS8P62241 208 aaKnown RBP3.18□□□□□ -1.9
VMP1-212ENST00000591782 CDK3Q00526 305 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 C2orf54Q08AI8 447 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 CHIT1Q13231 466 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 TWISTNBQ3B726 338 aaPredicted RBP3.18□□□□□ -1.9
VMP1-212ENST00000591782 FASTKD1Q53R41 847 aaKnown RBP3.18□□□□□ -1.9
VMP1-212ENST00000591782 BMP2KLQ5H9B9 411 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 PAGE2BQ5JRK9 111 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 SLX4IPQ5VYV7 408 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 KCTD16Q68DU8 428 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 TMEM211Q6ICI0 200 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 SLC35E4Q6ICL7 350 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 RWDD4Q6NW29 188 aaKnown RBP3.18□□□□□ -1.9
VMP1-212ENST00000591782 SCYL2Q6P3W7 929 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 AFTPHQ6ULP2 937 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 CEACAM20Q6UY09 585 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 RABEPKQ7Z6M1 372 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 PRUNE1Q86TP1 453 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 TAC4Q86UU9 113 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 IQCHQ86VS3 1027 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 FOXP4Q8IVH2 680 aaPredicted RBP3.18□□□□□ -1.9
VMP1-212ENST00000591782 KLHDC8BQ8IXV7 354 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 ARHGAP24Q8N264 748 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 STPG4Q8N801 248 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 LEMD2Q8NC56 503 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 OR10V1Q8NGI7 309 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 NCOA7Q8NI08 942 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 VANGL1Q8TAA9 524 aaPredicted RBP3.18□□□□□ -1.9
VMP1-212ENST00000591782 LRRC20Q8TCA0 184 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 SETD7Q8WTS6 366 aaKnown RBP3.18□□□□□ -1.9
VMP1-212ENST00000591782 PYROXD1Q8WU10 500 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 AZIN2Q96A70 460 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 VPS33AQ96AX1 596 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 TMCO6Q96DC7 493 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 LURAP1Q96LR2 239 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 ZNF597Q96LX8 424 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 ZNF578Q96N58 590 aaPredicted RBP3.18□□□□□ -1.9
VMP1-212ENST00000591782 QKIQ96PU8 341 aaKnown RBP eCLIP3.18□□□□□ -1.9
VMP1-212ENST00000591782 GCNAQ96QF7 691 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 APOL2Q9BQE5 337 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 TCEAL7Q9BRU2 100 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 TUBGCP2Q9BSJ2 902 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 EDEM2Q9BV94 578 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 FNDC11Q9BVV2 318 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 TPPP3Q9BW30 176 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 SPATA16Q9BXB7 569 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 BBS2Q9BXC9 721 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 TDRD1Q9BXT4 1180 aaKnown RBP3.18□□□□□ -1.9
VMP1-212ENST00000591782 LHX5Q9H2C1 402 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 DPAGT1Q9H3H5 408 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 PLGRKTQ9HBL7 147 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 SYTL2Q9HCH5 934 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 OLFML3Q9NRN5 406 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 TAB2Q9NYJ8 693 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 NINJ2Q9NZG7 142 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 DAPK2Q9UIK4 370 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 APPL1Q9UKG1 709 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 RAB23Q9ULC3 237 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 PSMD13Q9UNM6 376 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 TCF19Q9Y242 345 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms