RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 AQP7O14520 342 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 KLK8O60259 260 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 HCN1O60741 890 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 NADKO95544 446 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-226ENST00000591534 IGHG3P01860 377 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 IMPDH2P12268 514 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 CD99P14209 185 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 ZNF37AP17032 561 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-226ENST00000591534 GRK2P25098 689 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 SERPINB5P36952 375 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 KCNC1P48547 511 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 MAN2A2P49641 1150 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 GPR143P51810 404 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 HK2P52789 917 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 PLA2G16P53816 162 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 NUP107P57740 925 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 TFF3Q07654 80 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 LAPTM5Q13571 262 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 RUNX2Q13950 521 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 SLBPQ14493 270 aaKnown RBP eCLIP8.73□□□□□ -1.01
BRCA1-226ENST00000591534 ACAP2Q15057 778 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 SF3B4Q15427 424 aaKnown RBP eCLIP8.73□□□□□ -1.012e-6■■■□□ 15.1
BRCA1-226ENST00000591534 PPP1R3AQ16821 1122 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 CDKL4Q5MAI5 379 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 METTL2BQ6P1Q9 378 aaKnown RBP8.73□□□□□ -1.01
BRCA1-226ENST00000591534 EXOC3L1Q86VI1 746 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 CCDC71Q8IV32 467 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-226ENST00000591534 SLC22A9Q8IVM8 553 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.73□□□□□ -1.01
BRCA1-226ENST00000591534 DND1Q8IYX4 353 aaKnown RBP8.73□□□□□ -1.01
BRCA1-226ENST00000591534 MARVELD2Q8N4S9 558 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 FAM47BQ8NA70 645 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 ANKRD49Q8WVL7 239 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 UBE2E3Q969T4 207 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 MS4A6EQ96DS6 147 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 KCNC2Q96PR1 638 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 RASL10BQ96S79 203 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 TTYH2Q9BSA4 534 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 EFCAB11Q9BUY7 163 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 ALOXE3Q9BYJ1 711 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 TTTY12Q9BZ98 90 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 SPNS1Q9H2V7 528 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 CAB39LQ9H9S4 337 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 LYRM4Q9HD34 91 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 PFDN4Q9NQP4 134 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 PSD3Q9NYI0 1048 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 B4GALT7Q9UBV7 327 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 STK38LQ9Y2H1 464 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 NCOA6Q14686 2063 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-226ENST00000591534 A0A096LPK6 155 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 A0A1B0GVC2 190 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 TMEM120BA0PK00 339 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 NPEPPSL1A6NEC2 478 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 F8W735 103 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-226ENST00000591534 CDC7O00311 574 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 GLSO94925 669 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-226ENST00000591534 OR6B1O95007 311 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 S100BP04271 92 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-226ENST00000591534 LTA4HP09960 611 aaKnown RBP8.72□□□□□ -1.01
BRCA1-226ENST00000591534 NTF4P34130 210 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 SOX3P41225 446 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 LIM2P55344 173 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 TAS2R39P59534 338 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 RNF4P78317 190 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 HYAL4Q2M3T9 481 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 C18orf21Q32NC0 220 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-226ENST00000591534 TMEM35AQ53FP2 167 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 EMC4Q5J8M3 183 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 ZBTB37Q5TC79 503 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 TRILQ7L0X0 811 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 CLNKQ7Z7G1 428 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 SPATA6LQ8N4H0 392 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 CCDC63Q8NA47 563 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 OR5M9Q8NGP3 310 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 PPP1R14CQ8TAE6 165 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 RHEBL1Q8TAI7 183 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 SLC22A8Q8TCC7 542 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 PTCD3Q96EY7 689 aaKnown RBP8.72□□□□□ -1.01
BRCA1-226ENST00000591534 ART5Q96L15 291 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 FOXC2Q99958 501 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 MRPL57Q9BQC6 102 aaKnown RBP8.72□□□□□ -1.01
BRCA1-226ENST00000591534 SIKE1Q9BRV8 207 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 CENPKQ9BS16 269 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 TBCDQ9BTW9 1192 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 OR8D2Q9GZM6 311 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 SNX15Q9NRS6 342 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 PNPLA3Q9NST1 481 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 DNAJC11Q9NVH1 559 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 MS4A12Q9NXJ0 267 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 ALKBH4Q9NXW9 302 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 WWOXQ9NZC7 414 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 BOKQ9UMX3 212 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-226ENST00000591534 DAPP1Q9UN19 280 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 MTO1Q9Y2Z2 717 aaKnown RBP8.72□□□□□ -1.01
BRCA1-226ENST00000591534 PCDHGB3Q9Y5G1 929 aa8.72□□□□□ -1.01
BRCA1-226ENST00000591534 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.72□□□□□ -1.01
BRCA1-226ENST00000591534 ZFHX3Q15911 3703 aa8.71□□□□□ -1.01
BRCA1-226ENST00000591534 TRGV5A0A0B4J1U4 118 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 A0A0G2JN53 185 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 HSPB2A8KAH6 182 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms