RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CRB3Q9BUF7 120 aa14.41□□□□□ -0.1
CIRBP-228ENST00000590347 STAU1O95793 577 aaKnown RBP14.4□□□□□ -0.1
CIRBP-228ENST00000590347 OR12D1P0DN82 309 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 CTGFP29279 349 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 PSEN2P49810 448 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 ZNF235Q14590 738 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 DUOXA1Q1HG43 343 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 CASP12Q6UXS9 341 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 DEF8Q6ZN54 512 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 SERPINA11Q86U17 422 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 SECISBP2Q96T21 854 aaKnown RBP14.4□□□□□ -0.1
CIRBP-228ENST00000590347 GAS2L1Q99501 681 aaPredicted RBP14.4□□□□□ -0.1
CIRBP-228ENST00000590347 CIPCQ9C0C6 399 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 RNF32Q9H0A6 362 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 AP5M1Q9H0R1 490 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 ACER3Q9NUN7 267 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 COA4Q9NYJ1 87 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 FTSJ1Q9UET6 329 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 SRRDQ9UH36 339 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 E9PQ18 207 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 SMAD9O15198 467 aaKnown RBP14.4□□□□□ -0.1
CIRBP-228ENST00000590347 F2P00734 622 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 F12P00748 615 aaPredicted RBP14.4□□□□□ -0.1
CIRBP-228ENST00000590347 OR56A5P0C7T3 313 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 ODC1P11926 461 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 IL1RNP18510 177 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 ITPKAP23677 461 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 OR10A3P58181 314 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 FLI1Q01543 452 aaPredicted RBP14.4□□□□□ -0.1
CIRBP-228ENST00000590347 NHLRC3Q5JS37 347 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 NHLRC1Q6VVB1 395 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 MIB1Q86YT6 1006 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 RBM45Q8IUH3 476 aaKnown RBP14.4□□□□□ -0.1
CIRBP-228ENST00000590347 RTL3Q8N8U3 475 aaKnown RBP14.4□□□□□ -0.1
CIRBP-228ENST00000590347 GPR156Q8NFN8 814 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 OR52I1Q8NGK6 324 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 SPON2Q9BUD6 331 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 C1QTNF3Q9BXJ4 246 aa14.4□□□□□ -0.1
CIRBP-228ENST00000590347 CNOT2Q9NZN8 540 aaKnown RBP14.4□□□□□ -0.1
CIRBP-228ENST00000590347 TRIP12Q14669 1992 aaPredicted RBP14.39□□□□□ -0.11
CIRBP-228ENST00000590347 A0A1W2PPK0 400 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 OR6C74A6NCV1 312 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 SLC28A1O00337 649 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 PIRO00625 290 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 IGF2P01344 180 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 UCHL1P09936 223 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 HNF1BP35680 557 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 UBE2MP61081 183 aaKnown RBP14.39□□□□□ -0.11
CIRBP-228ENST00000590347 MLLT11Q13015 90 aaPredicted RBP14.39□□□□□ -0.11
CIRBP-228ENST00000590347 BAMBIQ13145 260 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 NUMA1Q14980 2115 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 SEC23BQ15437 767 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 ZBTB6Q15916 424 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 DNAJB7Q7Z6W7 309 aaPredicted RBP14.39□□□□□ -0.11
CIRBP-228ENST00000590347 SYT9Q86SS6 491 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 LRRTM4Q86VH4 590 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 TMEM163Q8TC26 289 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 GANCQ8TET4 914 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 LRR1Q96L50 414 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 PAAF1Q9BRP4 392 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 ZNF436Q9C0F3 470 aaPredicted RBP14.39□□□□□ -0.11
CIRBP-228ENST00000590347 CA10Q9NS85 328 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 ZAR1LA6NP61 321 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 MID1O15344 667 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 FABP1P07148 127 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 HK1P19367 917 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 MMP12P39900 470 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 MAD2L1Q13257 205 aaPredicted RBP14.39□□□□□ -0.11
CIRBP-228ENST00000590347 SWI5Q1ZZU3 235 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 DEFB115Q30KQ5 88 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 FAAP20Q6NZ36 180 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 ZNF704Q6ZNC4 412 aaPredicted RBP14.39□□□□□ -0.11
CIRBP-228ENST00000590347 SIAH3Q8IW03 269 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 OR4C15Q8NGM1 316 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 TBC1D20Q96BZ9 403 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 SLC38A3Q99624 504 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 OR10A4Q9H209 315 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 GPR31O00270 319 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 CH25HO95992 272 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 TFP02787 698 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 MAPKAPK2P49137 400 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 TTLL9Q3SXZ7 439 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 ARMC12Q5T9G4 340 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 PTRHD1Q6GMV3 140 aaKnown RBP14.39□□□□□ -0.11
CIRBP-228ENST00000590347 OR5M10Q6IEU7 315 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 BVESQ8NE79 360 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 MYEOVQ96EZ4 313 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 FNIP2Q9P278 1114 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 NFKBIL1Q9UBC1 381 aaPredicted RBP14.39□□□□□ -0.11
CIRBP-228ENST00000590347 POMT2Q9UKY4 750 aa14.39□□□□□ -0.11
CIRBP-228ENST00000590347 UBQLN1Q9UMX0 589 aaKnown RBP14.39□□□□□ -0.11
CIRBP-228ENST00000590347 C1SP09871 688 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 HOXB9P17482 250 aaPredicted RBP14.38□□□□□ -0.11
CIRBP-228ENST00000590347 SELENOWP63302 87 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 DGCR2P98153 550 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 PUM1Q14671 1186 aaKnown RBP eCLIP14.38□□□□□ -0.11
CIRBP-228ENST00000590347 PAN3Q58A45 887 aaKnown RBP14.38□□□□□ -0.11
CIRBP-228ENST00000590347 RPS26P11Q5JNZ5 115 aaPredicted RBP14.38□□□□□ -0.11
CIRBP-228ENST00000590347 OLIG3Q7RTU3 272 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 KCTD13Q8WZ19 329 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms