RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 AZIN1O14977 448 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 SEC22BO75396 215 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 NADKO95544 446 aaPredicted RBP11.15□□□□□ -0.62
TPM4-212ENST00000590180 CLPSP04118 112 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 CCL3P10147 92 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 PIGAP37287 484 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 CA7P43166 264 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 DNASE1L1P49184 302 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 MAP4K2Q12851 820 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 PCLAFQ15004 111 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 EXOSC7Q15024 291 aaKnown RBP11.15□□□□□ -0.62
TPM4-212ENST00000590180 EBPQ15125 230 aaKnown RBP11.15□□□□□ -0.62
TPM4-212ENST00000590180 ZNF791Q3KP31 576 aaPredicted RBP11.15□□□□□ -0.62
TPM4-212ENST00000590180 KRT71Q3SY84 523 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 CLEC6AQ6EIG7 209 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 PAOXQ6QHF9 649 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 GK5Q6ZS86 529 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 TRIM46Q7Z4K8 759 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 VWA5B2Q8N398 1253 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 ZNF615Q8N8J6 731 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 TP53INP1Q96A56 240 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 ZBTB9Q96C00 473 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 SPACA9Q96E40 222 aaPredicted RBP11.15□□□□□ -0.62
TPM4-212ENST00000590180 CNRIP1Q96F85 164 aaPredicted RBP11.15□□□□□ -0.62
TPM4-212ENST00000590180 TMEM109Q9BVC6 243 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 CENPHQ9H3R5 247 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 EML4Q9HC35 981 aaKnown RBP11.15□□□□□ -0.62
TPM4-212ENST00000590180 TNFRSF12AQ9NP84 129 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 MKS1Q9NXB0 559 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 TINAGQ9UJW2 476 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 CFL2Q9Y281 166 aa11.15□□□□□ -0.62
TPM4-212ENST00000590180 POLR3HQ9Y535 204 aaPredicted RBP11.15□□□□□ -0.62
TPM4-212ENST00000590180 NAV2Q8IVL1 2488 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 NINQ8N4C6 2090 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 A0A0G2JMM0 328 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 A0A1W2PPB8 328 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 A0A1W2PRS3 328 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 KIR3DP1A8MWS1 328 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 PRRG2O14669 202 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 TP53I11O14683 189 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 RGS16O15492 202 aaPredicted RBP11.14□□□□□ -0.63
TPM4-212ENST00000590180 CTIFO43310 598 aaKnown RBP11.14□□□□□ -0.63
TPM4-212ENST00000590180 RGS14O43566 566 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 CHEK2O96017 543 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 ATP1B1P05026 303 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 TUBBP07437 444 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 FBXO45P0C2W1 286 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 CREB1P16220 341 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 S1PR1P21453 382 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 COL8A1P27658 744 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 PTGS2P35354 604 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 NRG3P56975 720 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 KCNJ2P63252 427 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 DUSP2Q05923 314 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 MGAT2Q10469 447 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 LTB4RQ15722 352 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 PRICKLE4Q2TBC4 344 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 TRMT12Q53H54 448 aaKnown RBP11.14□□□□□ -0.63
TPM4-212ENST00000590180 CMPK2Q5EBM0 449 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 PRAMEF20Q5VT98 475 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 MTFR2Q6P444 385 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 GALNT18Q6P9A2 607 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 LYPD8Q6UX82 237 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 BNC2Q6ZN30 1099 aaPredicted RBP11.14□□□□□ -0.63
TPM4-212ENST00000590180 RGS9BPQ6ZS82 235 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 MAMDC2Q7Z304 686 aaPredicted RBP11.14□□□□□ -0.63
TPM4-212ENST00000590180 SLC22A16Q86VW1 577 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 SAMD14Q8IZD0 417 aaPredicted RBP11.14□□□□□ -0.63
TPM4-212ENST00000590180 LRRC25Q8N386 305 aaPredicted RBP11.14□□□□□ -0.63
TPM4-212ENST00000590180 MREGQ8N565 214 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 JSRP1Q96MG2 331 aaPredicted RBP11.14□□□□□ -0.63
TPM4-212ENST00000590180 ZNF681Q96N22 645 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 BBS4Q96RK4 519 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 TRMOQ9BU70 441 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 MECRQ9BV79 373 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 IL1RL2Q9HB29 575 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 SLC35C2Q9NQQ7 365 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 SIRT5Q9NXA8 310 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 TUBA8Q9NY65 449 aaPredicted RBP11.14□□□□□ -0.63
TPM4-212ENST00000590180 MAT2BQ9NZL9 334 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 RAB21Q9UL25 225 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 ENTPD4Q9Y227 616 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 ZNF835Q9Y2P0 537 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 NPFFR2Q9Y5X5 522 aa11.14□□□□□ -0.63
TPM4-212ENST00000590180 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.14□□□□□ -0.63
TPM4-212ENST00000590180 NOTCH2Q04721 2471 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 ATP6AP2A0A1C7CYW4 349 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 CYSRT1A8MQ03 144 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 NPHS1O60500 1241 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 ATP6AP2O75787 350 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 RSL1D1O76021 490 aaKnown RBP11.13□□□□□ -0.63
TPM4-212ENST00000590180 LRATO95237 230 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 CLDN1O95832 211 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 TPOP07202 933 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 LINC00032P0C843 101 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 PCSK2P16519 638 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 MPIP34949 423 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 GSTM5P46439 218 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 MRPS35P82673 323 aaKnown RBP11.13□□□□□ -0.63
TPM4-212ENST00000590180 ZNF763Q0D2J5 394 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms