RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 NUDT8Q8WV74 236 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 PPWD1Q96BP3 646 aaKnown RBP15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 VMP1Q96GC9 406 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 NSL1Q96IY1 281 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 MS4A4EQ96PG1 132 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 SH3GL1Q99961 368 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 CNPPD1Q9BV87 410 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 TMEM121BQ9BXQ6 578 aaPredicted RBP15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 RAD21L1Q9H4I0 556 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 WDR70Q9NW82 654 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 P4HTMQ9NXG6 502 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 PRODH2Q9UF12 536 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 ZNF639Q9UID6 485 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 C19orf53Q9UNZ5 99 aaPredicted RBP15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 SNX8Q9Y5X2 465 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 ASPMQ8IZT6 3477 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 C15orf38-AP3S2A0A0A6YYH1 394 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 A0A1W2PS29 197 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 ASPDHA6ND91 283 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 TTC36A6NLP5 189 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 EMC8O43402 210 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 ATP5HO75947 161 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 CPSF4O95639 269 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 KRT75O95678 551 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 ABCB1P08183 1280 aaPredicted RBP15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 SOAT1P35610 550 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 EIF2S3P41091 472 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 MC3RP41968 323 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 ANXA11P50995 505 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 FOXL2P58012 376 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 PSPHP78330 225 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 EEF1A2Q05639 463 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 VAC14Q08AM6 782 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 NFYCQ13952 458 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 ZNF267Q14586 743 aaPredicted RBP15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 PCOLCEQ15113 449 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 LTB4RQ15722 352 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 ZCCHC12Q6PEW1 402 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 UNQ6494/PRO21346Q6UXR6 183 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 ARPINQ7Z6K5 226 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 DHDDSQ86SQ9 333 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 POU5F2Q8N7G0 328 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 OR8K3Q8NH51 312 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 M1APQ8TC57 530 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 C8orf44Q96CB5 159 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 WDR77Q9BQA1 342 aaPredicted RBP15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 SIRT3Q9NTG7 399 aaPredicted RBP15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 SSUH2Q9Y2M2 353 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 AP3M1Q9Y2T2 418 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 MRPS18BQ9Y676 258 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 GMEB1Q9Y692 573 aa15.82■□□□□ 0.12
SCAMP4-211ENST00000588907 CEP295Q9C0D2 2601 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 RNF103-CHMP3A0A140T963 221 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 MED19A0JLT2 244 aaPredicted RBP15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 FBP2O00757 339 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 SEC24DO94855 1032 aaPredicted RBP15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 DDAH2O95865 285 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 IGKV3-11P04433 115 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 CHI3L1P36222 383 aaPredicted RBP15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 CCT3P49368 545 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 CDK9P50750 372 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 SLC26A5P58743 744 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 MGAT2Q10469 447 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 PAGE3Q5JUK9 113 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 FAM69BQ5VUD6 431 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 C6orf89Q6UWU4 347 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 RNF111Q6ZNA4 994 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 ZNF621Q6ZSS3 439 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 TMEM102Q8N9M5 508 aaPredicted RBP15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 ADCY4Q8NFM4 1077 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 OR7G2Q8NG99 324 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 KAT2AQ92830 837 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 RCN3Q96D15 328 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 FAM120BQ96EK7 910 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 SENP5Q96HI0 755 aaPredicted RBP15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 NAF1Q96HR8 494 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 HOPXQ9BPY8 73 aaPredicted RBP15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 SLC35A5Q9BS91 424 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 SEMA4CQ9C0C4 833 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 OR8D2Q9GZM6 311 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 PAIP1Q9H074 479 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 CXorf36Q9H7Y0 433 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 MMP25Q9NPA2 562 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 ZCCHC3Q9NUD5 404 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 ARL8BQ9NVJ2 186 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 FBXL4Q9UKA2 621 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 ERVK-19Q9WJR5 959 aa15.81■□□□□ 0.12
SCAMP4-211ENST00000588907 A8MUA0 341 aa15.8■□□□□ 0.12
SCAMP4-211ENST00000588907 EVPLLA8MZ36 301 aa15.8■□□□□ 0.12
SCAMP4-211ENST00000588907 UPK1AO00322 258 aa15.8■□□□□ 0.12
SCAMP4-211ENST00000588907 PSMG1O95456 288 aa15.8■□□□□ 0.12
SCAMP4-211ENST00000588907 CAPNS1P04632 268 aa15.8■□□□□ 0.12
SCAMP4-211ENST00000588907 EFNA1P20827 205 aaPredicted RBP15.8■□□□□ 0.12
SCAMP4-211ENST00000588907 PRIM2P49643 509 aa15.8■□□□□ 0.12
SCAMP4-211ENST00000588907 NUDT2P50583 147 aa15.8■□□□□ 0.12
SCAMP4-211ENST00000588907 RASSF2P50749 326 aa15.8■□□□□ 0.12
SCAMP4-211ENST00000588907 CLCN2P51788 898 aa15.8■□□□□ 0.12
SCAMP4-211ENST00000588907 MRPS35P82673 323 aaKnown RBP15.8■□□□□ 0.12
SCAMP4-211ENST00000588907 FOXK2Q01167 660 aa15.8■□□□□ 0.12
SCAMP4-211ENST00000588907 CDC20Q12834 499 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms