RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 A0A1W2PPB8 328 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 A0A1W2PRS3 328 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 TLDC2A0PJX2 215 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 PINLYPA6NC86 204 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 KIR3DP1A8MWS1 328 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 G3V2L1 256 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 ZNHIT1O43257 154 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 PLIN3O60664 434 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 GLSO94925 669 aaPredicted RBP11.41□□□□□ -0.58
SS18-225ENST00000585121 CPA3P15088 417 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 KRT4P19013 534 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 HTR1EP28566 365 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 GSTM5P46439 218 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 DNASE1L1P49184 302 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 NAGLUP54802 743 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 DNAJB13P59910 316 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 VSNL1P62760 191 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 ADORA2A-AS1P86434 159 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 BTKQ06187 659 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 IFFO1Q0D2I5 559 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 SLC10A1Q14973 349 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 HEPACAMQ14CZ8 416 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 TBCELQ5QJ74 424 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 CHERPQ8IWX8 916 aaKnown RBP11.41□□□□□ -0.58
SS18-225ENST00000585121 VWA5B2Q8N398 1253 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 FBXW8Q8N3Y1 598 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 EPS8L3Q8TE67 593 aaKnown RBP11.41□□□□□ -0.58
SS18-225ENST00000585121 PHF10Q8WUB8 498 aaKnown RBP11.41□□□□□ -0.58
SS18-225ENST00000585121 PHF12Q96QT6 1004 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 ACPTQ9BZG2 426 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 TP63Q9H3D4 680 aaPredicted RBP11.41□□□□□ -0.58
SS18-225ENST00000585121 GSTO2Q9H4Y5 243 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 EXO5Q9H790 373 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 ZDHHC11Q9H8X9 412 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 PLSCR2Q9NRY7 297 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 TUBA8Q9NY65 449 aaPredicted RBP11.41□□□□□ -0.58
SS18-225ENST00000585121 COQ3Q9NZJ6 369 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 UTS2RQ9UKP6 389 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 EMCNQ9ULC0 261 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 DLGAP4Q9Y2H0 992 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 TIMM22Q9Y584 194 aa11.41□□□□□ -0.58
SS18-225ENST00000585121 ATP6AP2A0A1C7CYW4 349 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 A0A1W2PS29 197 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 SERTM1A2A2V5 107 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 ATP6AP2O75787 350 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 CLPSP04118 112 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 ATP1B1P05026 303 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 CT62P0C5K7 136 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 CHN1P15882 459 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 PIGAP37287 484 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 MAGEA5P43359 124 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 HTR6P50406 440 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 HMGCS1Q01581 520 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 MAP4K2Q12851 820 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 NTRK2Q16620 822 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 HYAL4Q2M3T9 481 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 PRAMEF20Q5VT98 475 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 LYPD8Q6UX82 237 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 C3P1Q6ZMU1 363 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 FRMD7Q6ZUT3 714 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 SH2D5Q6ZV89 423 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 FGD2Q7Z6J4 655 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 LRRC25Q8N386 305 aaPredicted RBP11.4□□□□□ -0.58
SS18-225ENST00000585121 RIBC1Q8N443 379 aaPredicted RBP11.4□□□□□ -0.58
SS18-225ENST00000585121 TMEM251Q8N6I4 163 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 ZNF615Q8N8J6 731 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 ZNF441Q8N8Z8 693 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 C17orf47Q8NEP4 570 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 OR10G3Q8NGC4 313 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 OR5M3Q8NGP4 307 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 DIO2Q92813 273 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 KCNA7Q96RP8 456 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 SH2D2AQ9NP31 389 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 ZFP64Q9NPA5 681 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 B4GALT7Q9UBV7 327 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 PRODH2Q9UF12 536 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 NPFFR2Q9Y5X5 522 aa11.4□□□□□ -0.58
SS18-225ENST00000585121 CROCCQ5TZA2 2017 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 OR14I1A6ND48 311 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 FOXO6A8MYZ6 492 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 NPIPA2E9PIF3 369 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 NPIPA3F8WFD2 350 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 BCKDKO14874 412 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 ATP8B1O43520 1251 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 BCAS2O75934 225 aaPredicted RBP11.4□□□□□ -0.59
SS18-225ENST00000585121 CLDN14O95500 239 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 IL3P08700 152 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 ANXA4P09525 319 aaPredicted RBP11.4□□□□□ -0.59
SS18-225ENST00000585121 TIA1P31483 386 aaKnown RBP eCLIP11.4□□□□□ -0.59
SS18-225ENST00000585121 MAN2A2P49641 1150 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 FOXO1Q12778 655 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 RPS6KA2Q15349 733 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 ZNF630Q2M218 657 aaPredicted RBP11.4□□□□□ -0.59
SS18-225ENST00000585121 PRICKLE4Q2TBC4 344 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 LIPMQ5VYY2 423 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 TMEM198Q66K66 360 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 SCIMPQ6UWF3 145 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 HOMEZQ8IX15 550 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 MMP21Q8N119 569 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 C4orf33Q8N1A6 199 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms