RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 ZCCHC23Q6ZST2 131 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 FRMD7Q6ZUT3 714 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 FRA10AC1Q70Z53 315 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 ZZZ3Q8IYH5 903 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 FBXW8Q8N3Y1 598 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 FAM47BQ8NA70 645 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 CCDC197Q8NCU1 140 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 SRFBP1Q8NEF9 429 aaKnown RBP9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 OR2L5Q8NG80 312 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 FAM222BQ8WU58 562 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 MS4A6EQ96DS6 147 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 TMEM237Q96Q45 408 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 GPATCH1Q9BRR8 931 aaKnown RBP9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 ALOXE3Q9BYJ1 711 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 OR8D2Q9GZM6 311 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 REXO4Q9GZR2 422 aaKnown RBP9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 FAM107BQ9H098 131 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 GSTO2Q9H4Y5 243 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 NT5DC2Q9H857 520 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 ZNF395Q9H8N7 513 aaPredicted RBP9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 LIN28AQ9H9Z2 209 aaKnown RBP9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 EML4Q9HC35 981 aaKnown RBP9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 PRM3Q9NNZ6 103 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 VTI1BQ9UEU0 232 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 Q9UFV3 132 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 ARL2BPQ9Y2Y0 163 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 RAP2CQ9Y3L5 183 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 PCDHGB3Q9Y5G1 929 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 FAM215AQ9Y5M1 114 aa9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 PRRC2AP48634 2157 aaKnown RBP9.92□□□□□ -0.82
CSNK1D-226ENST00000585026 TMEM200CA6NKL6 621 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 G3V3Y1 287 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 SYT5O00445 386 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 PRKNO60260 465 aaPredicted RBP9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 WDR47O94967 919 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 FGF4P08620 206 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 RPS17P08708 135 aaKnown RBP9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 GFAPP14136 432 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 PPP2R1BP30154 601 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 UQCRC1P31930 480 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 RPL14P50914 215 aaKnown RBP9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 PLA2G16P53816 162 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 DLX5P56178 289 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 RNF4P78317 190 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 BIKQ13323 160 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 SLBPQ14493 270 aaKnown RBP eCLIP9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 PFKFB4Q16877 469 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 MPEG1Q2M385 716 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 FLYWCH1Q4VC44 716 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 CFAP157Q5JU67 520 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 SLC22A10Q63ZE4 541 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 RTL6Q6ICC9 239 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 SULT1C3Q6IMI6 304 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 C6orf89Q6UWU4 347 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 C16orf47Q6ZP98 133 aaPredicted RBP9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 CLNKQ7Z7G1 428 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 WDR75Q8IWA0 830 aaKnown RBP9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 DND1Q8IYX4 353 aaKnown RBP9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 TCAIMQ8N3R3 496 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 LIX1Q8N485 282 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 PTGR2Q8N8N7 351 aaPredicted RBP9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 SLC22A8Q8TCC7 542 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 UBTD2Q8WUN7 234 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 MBD6Q96DN6 1003 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 PHF21BQ96EK2 531 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 QPCTLQ9NXS2 382 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 GPRC5BQ9NZH0 403 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 BOKQ9UMX3 212 aaPredicted RBP9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 DAPP1Q9UN19 280 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 NF1P21359 2839 aa9.91□□□□□ -0.82
CSNK1D-226ENST00000585026 DNAJC13O75165 2243 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 A0A0G2JN53 185 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 A6NNC1 897 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 C17orf105B2RV13 164 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 SUPT3HB4E1H0 165 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 CYR61O00622 381 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 ZNF195O14628 629 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 CLGNO14967 610 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 PROM1O43490 865 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 SUPT3HO75486 399 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 LYPLA1O75608 230 aaPredicted RBP9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 HSPA4LO95757 839 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 ADH7P40394 386 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 DNASE1L1P49184 302 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 LIM2P55344 173 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 FOXD4Q12950 439 aaPredicted RBP9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 HIST2H2ACQ16777 129 aaPredicted RBP9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 PIGGQ5H8A4 983 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 HIST2H2AA3Q6FI13 130 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 ABHD17CQ6PCB6 329 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 SLCO4C1Q6ZQN7 724 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 BIVMQ86UB2 503 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 CDC20BQ86Y33 519 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 KIF18BQ86Y91 864 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 LIX1LQ8IVB5 337 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 MMP21Q8N119 569 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 SLC15A4Q8N697 577 aa9.9□□□□□ -0.82
CSNK1D-226ENST00000585026 CCNYL1Q8N7R7 359 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms