RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	PPIAL4C	A0A0B4J2A2	164 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	ANKRD66	B4E2M5	251 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	PPIAL4D	F5H284	164 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772		F8VZ95	297 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	CEP104	O60308	925 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	NRP2	O60462	931 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	GCM2	O75603	506 aa	Predicted RBP	4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	TRAPPC6A	O75865	159 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	AP2A1	O95782	977 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	LY6G6C	O95867	125 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	H2AFZ	P0C0S5	128 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	DHRS4L1	P0CG22	281 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	PPIAL4F	P0DN26	164 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	SAG	P10523	405 aa	Predicted RBP	4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	IFNGR1	P15260	489 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	FER	P16591	822 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	ZNF708	P17019	499 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	CHRNB2	P17787	502 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	ERCC2	P18074	760 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	APOBEC3A	P31941	199 aa	Predicted RBP	4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	PSMC2	P35998	433 aa	Known RBP	4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	PRLHR	P49683	370 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	PPOX	P50336	477 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	LHX2	P50458	406 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	PRSS12	P56730	875 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	CLDN15	P56746	228 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	CLDN18	P56856	261 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	SNRPD2	P62316	118 aa	Known RBP	4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	MYBPC1	Q00872	1141 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	RELA	Q04206	551 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	RPS6KA1	Q15418	735 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	NDUFA9	Q16795	377 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	ZNF791	Q3KP31	576 aa	Predicted RBP	4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	PTPN20	Q4JDL3	420 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	GLE1	Q53GS7	698 aa	Known RBP	4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	EIPR1	Q53HC9	387 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	HSP90B2P	Q58FF3	399 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	FNDC7	Q5VTL7	733 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	ACSM5	Q6NUN0	579 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	EMB	Q6PCB8	327 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	NHLRC1	Q6VVB1	395 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	ZNF620	Q6ZNG0	422 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	QSOX2	Q6ZRP7	698 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	LINC00336	Q6ZUF6	198 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	H2AFV	Q71UI9	128 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	P4HA3	Q7Z4N8	544 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	EXOC3L1	Q86VI1	746 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	KLHL7	Q8IXQ5	586 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	DND1	Q8IYX4	353 aa	Known RBP	4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	BBS5	Q8N3I7	341 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	SPATA6L	Q8N4H0	392 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	MREG	Q8N565	214 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	ANKS4B	Q8N8V4	417 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	KCT2	Q8NC54	265 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	ZNF740	Q8NDX6	193 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	ANKK1	Q8NFD2	765 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	OR4F17	Q8NGA8	305 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	OR9A4	Q8NGU2	314 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	OR8K3	Q8NH51	312 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	GDAP1	Q8TB36	358 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	ACTRT1	Q8TDG2	376 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	WDR60	Q8WVS4	1066 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	NEU4	Q8WWR8	484 aa	Predicted RBP	4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	ZNF606	Q8WXB4	792 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	IFT81	Q8WYA0	676 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	KAT5	Q92993	513 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	NXNL1	Q96CM4	212 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	DTNBP1	Q96EV8	351 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	PBK	Q96KB5	322 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	OR4F4	Q96R69	305 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	PCDHB18P	Q96TA0	734 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	CSF3R	Q99062	836 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	ASCL2	Q99929	193 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	CCDC77	Q9BR77	488 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	INPP5K	Q9BT40	448 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	STK33	Q9BYT3	514 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	SYNPO2L	Q9H987	977 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	SLC6A13	Q9NSD5	602 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	RNF14	Q9UBS8	474 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	SOX13	Q9UN79	622 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	POMT1	Q9Y6A1	747 aa		4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	BZW2	Q9Y6E2	419 aa	Known RBP	4.29	□□□□□ -1.72
MSI2-216	ENST00000582772	ARHGAP32	A7KAX9	2087 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	TMCO5B	A8MYB1	307 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	GOLGA8K	D6RF30	607 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	PLPP2	O43688	288 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	VPS26A	O75436	327 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	TNFRSF21	O75509	655 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	ACSL3	O95573	720 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	TMEM253	P0C7T8	217 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	KRT13	P13646	458 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	CD33	P20138	364 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	CD9	P21926	228 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	ACADL	P28330	430 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	GPC1	P35052	558 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	GCK	P35557	465 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	MARCKSL1	P49006	195 aa		4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	IDH3G	P51553	393 aa	Predicted RBP	4.28	□□□□□ -1.72
MSI2-216	ENST00000582772	GFRA1	P56159	465 aa		4.28	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms