RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	DMRTA2	Q96SC8	542 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TTTY12	Q9BZ98	90 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	OR10A5	Q9H207	317 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TP63	Q9H3D4	680 aa	Predicted RBP	11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	MID1IP1	Q9NPA3	183 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	OXSM	Q9NWU1	459 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ZNF639	Q9UID6	485 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PCNX1	Q96RV3	2341 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	NCOA6	Q14686	2063 aa	Predicted RBP	11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708		A0A1B0GTH9	108 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	GNG14	A0A1W2PPG7	69 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	NPIPB8	E9PQR5	432 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ACOX3	O15254	700 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	HNRNPR	O43390	633 aa	Known RBP	11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PCDH7	O60245	1069 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	HCN1	O60741	890 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SLITRK5	O94991	958 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SNX4	O95219	450 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	HOXD4	P09016	255 aa	Predicted RBP	11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CCL3	P10147	92 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	S1PR1	P21453	382 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	NT5E	P21589	574 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SLCO1A2	P46721	670 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SLC10A1	Q14973	349 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	RPS6KA2	Q15349	733 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	LIPM	Q5VYY2	423 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	WDR93	Q6P2C0	686 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TMEM81	Q6P7N7	255 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	FGD2	Q7Z6J4	655 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	LRRC25	Q8N386	305 aa	Predicted RBP	11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	OR52N2	Q8NGI0	321 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ZNF675	Q8TD23	568 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	UCN3	Q969E3	161 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ADIPOR1	Q96A54	375 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	KLHL29	Q96CT2	875 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	HSPBAP1	Q96EW2	488 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ZNF681	Q96N22	645 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ZFP64	Q9NPA5	681 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	GIMAP4	Q9NUV9	329 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	B4GALT7	Q9UBV7	327 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PRODH2	Q9UF12	536 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	DLGAP4	Q9Y2H0	992 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PCDHGB3	Q9Y5G1	929 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	NPFFR2	Q9Y5X5	522 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	LRBA	P50851	2863 aa		11.6	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PINLYP	A6NC86	204 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	AQP7	O14520	342 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ZNF500	O60304	480 aa	Predicted RBP	11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CDC40	O60508	579 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CRCP	O75575	148 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ERAL1	O75616	437 aa	Known RBP	11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	RSL1D1	O76021	490 aa	Known RBP	11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	UROS	P10746	265 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SSTR4	P31391	388 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TIA1	P31483	386 aa	Known RBP eCLIP	11.59	□□□□□ -0.55	2e-8	■■□□□ 11.4
CDK5RAP3-222	ENST00000581708	MPI	P34949	423 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	RFC3	P40938	356 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	NR0B1	P51843	470 aa	Known RBP	11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	KCNJ2	P63252	427 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	RAE1	P78406	368 aa	Known RBP	11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ADORA2A-AS1	P86434	159 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	MGAT2	Q10469	447 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CEBPE	Q15744	281 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ZNF630	Q2M218	657 aa	Predicted RBP	11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TCHHL1	Q5QJ38	904 aa	Predicted RBP	11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SP5	Q6BEB4	398 aa	Predicted RBP	11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	IKBIP	Q70UQ0	350 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TMEM251	Q8N6I4	163 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CCDC63	Q8NA47	563 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	EPS8L3	Q8TE67	593 aa	Known RBP	11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PHF12	Q96QT6	1004 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	HBEGF	Q99075	208 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	IQCG	Q9H095	443 aa	Known RBP	11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	STMN4	Q9H169	189 aa	Predicted RBP	11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ACKR4	Q9NPB9	350 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TAS2R7	Q9NYW3	318 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	COQ3	Q9NZJ6	369 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	MAT2B	Q9NZL9	334 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	LGALS13	Q9UHV8	139 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SH3BGRL2	Q9UJC5	107 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	UTS2R	Q9UKP6	389 aa		11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CNOT11	Q9UKZ1	510 aa	Known RBP	11.59	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ZNF407	Q9C0G0	2248 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708		A0A0G2JMM0	328 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708		A0A1W2PPB8	328 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708		A0A1W2PRS3	328 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	FIGNL2	A6NMB9	653 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	KIR3DP1	A8MWS1	328 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	PRSS44	E7EML9	344 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	UBFD1	O14562	309 aa	Known RBP	11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	ADAM10	O14672	748 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	T	O15178	435 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	SLU7	O95391	586 aa	Known RBP	11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	CLDN14	O95500	239 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	TPO	P07202	933 aa		11.58	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms