RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 PPP1R3AQ16821 1122 aa12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 TMEM249Q2WGJ8 235 aa12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 TMEM81Q6P7N7 255 aa12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 ANGPTL8Q6UXH0 198 aa12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 ZNF793Q6ZN11 406 aa12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 TRIM42Q8IWZ5 723 aa12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 CNEP1R1Q8N9A8 125 aa12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 OR1J4Q8NGS1 313 aa12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 ANKRD7Q92527 254 aa12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 AKAP1Q92667 903 aaKnown RBP eCLIP12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 PPWD1Q96BP3 646 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 KCNC2Q96PR1 638 aa12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 KCNK17Q96T54 332 aa12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 ERVK-6Q9BXR3 956 aa12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 LZTFL1Q9NQ48 299 aa12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 ERVK-19Q9WJR5 959 aa12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 SPACA6W5XKT8 324 aa12.51□□□□□ -0.41
CSNK1D-219ENST00000581660 CDC7O00311 574 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 EMC8O43402 210 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 H2AFYO75367 372 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 FGGP02679 453 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 SOD3P08294 240 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 DANCRP0C864 163 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 TBXA2RP21731 343 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 ATP5A1P25705 553 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 CXCR5P32302 372 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 MAGEA6P43360 314 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 VPS41P49754 854 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 CDKN2DP55273 166 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 VLDLRP98155 873 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 FGFBP1Q14512 234 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 GSTA5Q7RTV2 222 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 UBE3DQ7Z6J8 389 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 OR4N5Q8IXE1 308 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 ST13P4Q8IZP2 240 aaPredicted RBP12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 KRT78Q8N1N4 520 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 TXLNBQ8N3L3 684 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 ACOT4Q8N9L9 421 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 REPS1Q96D71 796 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 ZNF845Q96IR2 970 aaPredicted RBP12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 KRT12Q99456 494 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 PELOQ9BRX2 385 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 TBCDQ9BTW9 1192 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 SHARPINQ9H0F6 387 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 HEY2Q9UBP5 337 aa12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 YLPM1P49750 1951 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-219ENST00000581660 ANKDD1BA6NHY2 528 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 SLC22A20A6NK97 555 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 PGRP06401 933 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 ALOX15P16050 662 aaPredicted RBP12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 CDC25BP30305 580 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 KCNJ5P48544 419 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 UBAP2Q5T6F2 1119 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 ANKRD22Q5VYY1 191 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 ANKRD34AQ69YU3 496 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 ADNP2Q6IQ32 1131 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 DRICH1Q6PGQ1 229 aaPredicted RBP12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 P4HA3Q7Z4N8 544 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 IFNEQ86WN2 208 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 SRFBP1Q8NEF9 429 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 OR14L1PQ8NHC6 308 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 PLPPR2Q96GM1 343 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 F2RL3Q96RI0 385 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 TNFRSF13CQ96RJ3 184 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 FAM167BQ9BTA0 163 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 EHD1Q9H4M9 534 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 ESRP2Q9H6T0 727 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 ACTR8Q9H981 624 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 BARX1Q9HBU1 254 aaPredicted RBP12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 SERHLQ9NQF3 203 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 C20orf96Q9NUD7 363 aaPredicted RBP12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 IKZF3Q9UKT9 509 aa12.49□□□□□ -0.41
CSNK1D-219ENST00000581660 C2orf92A0A1B0GVN3 265 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 CBR3O75828 277 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 SRD5A1P18405 259 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 HIST1H1TP22492 207 aaPredicted RBP12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 CPN2P22792 545 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 GABRB3P28472 473 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 GALNSP34059 522 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 CDKN1AP38936 164 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 STARP49675 285 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 CASP9P55211 416 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 CDKL1Q00532 357 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 SNTA1Q13424 505 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 ZNF267Q14586 743 aaPredicted RBP12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 SETDB1Q15047 1291 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 GUSBP1Q15486 140 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 BCL2A1Q16548 175 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 KBTBD12Q3ZCT8 623 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 RBM20Q5T481 1227 aaKnown RBP12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 SLC30A6Q6NXT4 461 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 AAGABQ6PD74 315 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 MEX3DQ86XN8 651 aaKnown RBP12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 ZNF610Q8N9Z0 462 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 C2CD4AQ8NCU7 369 aaPredicted RBP12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 C17orf47Q8NEP4 570 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 LILRB1Q8NHL6 650 aaPredicted RBP12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 TANKQ92844 425 aa12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 GTPBP3Q969Y2 492 aaKnown RBP12.48□□□□□ -0.41
CSNK1D-219ENST00000581660 PDLIM5Q96HC4 596 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms