RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 CAPN14A8MX76 684 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 C9JVG2 144 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 NKX2-8O15522 239 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 EFSO43281 561 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 PRAMEF2O60811 474 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 SCN2BO60939 215 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 SEC24DO94855 1032 aaPredicted RBP13.32□□□□□ -0.28
SKA2-205ENST00000580541 KRT75O95678 551 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 ABCB1P08183 1280 aaPredicted RBP13.32□□□□□ -0.28
SKA2-205ENST00000580541 KRT16P08779 473 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 ZCCHC18P0CG32 403 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 COX6A1P12074 109 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 PPIBP23284 216 aaKnown RBP13.32□□□□□ -0.28
SKA2-205ENST00000580541 MAGEA8P43361 318 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 ZFP36L2P47974 494 aaKnown RBP13.32□□□□□ -0.28
SKA2-205ENST00000580541 ANXA11P50995 505 aaKnown RBP13.32□□□□□ -0.28
SKA2-205ENST00000580541 TMPRSS3P57727 454 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 FOXL2P58012 376 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 SLC26A5P58743 744 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 HBA1P69905 142 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 PHC1P78364 1004 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 TXNL4AP83876 142 aaKnown RBP13.32□□□□□ -0.28
SKA2-205ENST00000580541 PCOLCEQ15113 449 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 TLR1Q15399 786 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 ZNHIT3Q15649 155 aaPredicted RBP13.32□□□□□ -0.28
SKA2-205ENST00000580541 PRSS53Q2L4Q9 553 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 BTBD16Q32M84 506 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 ZNF628Q5EBL2 1059 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 FAM69BQ5VUD6 431 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 HLA-DQA1Q5Y7H0 255 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 JMJD6Q6NYC1 403 aaPredicted RBP13.32□□□□□ -0.28
SKA2-205ENST00000580541 ZCCHC12Q6PEW1 402 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 RNF111Q6ZNA4 994 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 GK5Q6ZS86 529 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 SLC29A4Q7RTT9 530 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 ANKRD46Q86W74 232 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 SNX32Q86XE0 403 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 KBTBD2Q8IY47 623 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 DPP10Q8N608 796 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 KDF1Q8NAX2 398 aaPredicted RBP13.32□□□□□ -0.28
SKA2-205ENST00000580541 OR8K3Q8NH51 312 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 SLC2A12Q8TD20 617 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 SFXN5Q8TD22 340 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 GTF2H4Q92759 462 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 IMMP1LQ96LU5 166 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 SH3GL1Q99961 368 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 RAD21L1Q9H4I0 556 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 MMP25Q9NPA2 562 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 SLAMF7Q9NQ25 335 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 MAT2BQ9NZL9 334 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 TAGLN3Q9UI15 199 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 C19orf53Q9UNZ5 99 aaPredicted RBP13.32□□□□□ -0.28
SKA2-205ENST00000580541 ERVK-19Q9WJR5 959 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 MAN2B2Q9Y2E5 1009 aa13.32□□□□□ -0.28
SKA2-205ENST00000580541 A0A087WV48 116 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 A0A096LPI6 279 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 IGHV3-20A0A0C4DH32 117 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 ZFAND5O76080 213 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 PRKAR1AP10644 381 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 ESRRAP11474 423 aaPredicted RBP13.31□□□□□ -0.28
SKA2-205ENST00000580541 CAPN3P20807 821 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 CHI3L1P36222 383 aaPredicted RBP13.31□□□□□ -0.28
SKA2-205ENST00000580541 PRIM2P49643 509 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 EFNA3P52797 238 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 DCAF7P61962 342 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 PSPHP78330 225 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 CDC20Q12834 499 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 ATP1A4Q13733 1029 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 DCAF10Q5QP82 559 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 TMEM107Q6UX40 140 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 HSDL2Q6YN16 418 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 CLECL1Q8IZS7 167 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 OR2L13Q8N349 312 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 FITM2Q8N6M3 262 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 NUP43Q8NFH3 380 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 NUDT8Q8WV74 236 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 KAT2AQ92830 837 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 ROPN1LQ96C74 230 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 NSL1Q96IY1 281 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 WDR77Q9BQA1 342 aaPredicted RBP13.31□□□□□ -0.28
SKA2-205ENST00000580541 DEFB126Q9BYW3 111 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 OR10A5Q9H207 317 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 ZNF160Q9HCG1 818 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 SLC52A3Q9NQ40 469 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 ZCCHC3Q9NUD5 404 aaKnown RBP13.31□□□□□ -0.28
SKA2-205ENST00000580541 NDE1Q9NXR1 346 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 NTMQ9P121 344 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 ZNF639Q9UID6 485 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 TEKT2Q9UIF3 430 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 FAF1Q9UNN5 650 aaPredicted RBP13.31□□□□□ -0.28
SKA2-205ENST00000580541 CORO2BQ9UQ03 480 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 RAXQ9Y2V3 346 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 PCDHGB3Q9Y5G1 929 aa13.31□□□□□ -0.28
SKA2-205ENST00000580541 A0A1W2PS29 197 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 DUXAA6NLW8 204 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 CCT8L1PA6NM43 557 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 EVPLLA8MZ36 301 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 MRASO14807 208 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 DDAH2O95865 285 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms