RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 ZNF629Q9UEG4 869 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-212ENST00000579175 PCDHGB3Q9Y5G1 929 aa11.59□□□□□ -0.55
CDK5RAP3-212ENST00000579175 PSAT1Q9Y617 370 aa11.59□□□□□ -0.55
CDK5RAP3-212ENST00000579175 FLNAP21333 2647 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-212ENST00000579175 GMNCA6NCL1 334 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TRIM49D1C9J1S8 452 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 FGF17O60258 216 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ATE1O95260 518 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TBX6O95947 436 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 S100BP04271 92 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CREB1P16220 341 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 KRT4P19013 534 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TLX1P31314 330 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CEACAM8P31997 349 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 STT3AP46977 705 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 MASP1P48740 699 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 RAP1GDS1P52306 607 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 PLIN5Q00G26 463 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CHIT1Q13231 466 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 SLAMF1Q13291 335 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ZNF267Q14586 743 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 POU4F3Q15319 338 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 PCBP2Q15366 365 aaKnown RBP eCLIP11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 PDK4Q16654 411 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ACSF3Q4G176 576 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 GRTP1Q5TC63 336 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ZNF793Q6ZN11 406 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ZNF771Q7L3S4 317 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 UBE3DQ7Z6J8 389 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ZC3HC1Q86WB0 502 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 GPSM1Q86YR5 675 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 PM20D2Q8IYS1 436 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 DND1Q8IYX4 353 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 C4orf33Q8N1A6 199 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TCAIMQ8N3R3 496 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ANKRD42Q8N9B4 389 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 BANPQ8N9N5 519 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 OR10G3Q8NGC4 313 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ACMSDQ8TDX5 336 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 DYDC1Q8WWB3 177 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 DIO2Q92813 273 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ZNF597Q96LX8 424 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 EHD1Q9H4M9 534 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 RPF2Q9H7B2 306 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TXNDC16Q9P2K2 825 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 NCKAP5O14513 1909 aa11.58□□□□□ -0.56
CDK5RAP3-212ENST00000579175 FREM3P0C091 2139 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 A0A1W2PPM1 405 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 LRRC3CA6NJW4 275 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 KDM4EB2RXH2 506 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 HRKO00198 91 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TP53I11O14683 189 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TAPBPO15533 448 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 OR10H2O60403 315 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 FAM107AO95990 144 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ALOX15P16050 662 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 HIST1H1TP22492 207 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TIMP3P35625 211 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ZNF136P52737 540 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 DCAF7P61962 342 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 HERVK_113P63132 956 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ERVK-8P63133 956 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 NKX6-1P78426 367 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ILF2Q12905 390 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 BIKQ13323 160 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 FBXL19-AS1Q494R0 122 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 SULT1C3Q6IMI6 304 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 RNF111Q6ZNA4 994 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TAGAPQ8N103 731 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 BCAS4Q8TDM0 211 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CKAP2Q8WWK9 683 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 EXT2Q93063 718 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ISL2Q96A47 359 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CHMP6Q96FZ7 201 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TIMP4Q99727 224 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TMEM79Q9BSE2 394 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ERVK-6Q9BXR3 956 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 NSRP1Q9H0G5 558 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 SH2D2AQ9NP31 389 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ERVK-19Q9WJR5 959 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 SLC6A5Q9Y345 797 aa11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CHCHD2Q9Y6H1 151 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CLCA1A8K7I4 914 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CAPN14A8MX76 684 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 NDUFAB1O14561 156 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CASKO14936 926 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ARHGEF9O43307 516 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 PRAMEF4O60810 478 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 PIAS1O75925 651 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 FBXO45P0C2W1 286 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CCDC166P0CW27 439 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CD22P20273 847 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CTSSP25774 331 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 HOXC12P31275 282 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 OPRM1P35372 400 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CRYZQ08257 329 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 DDX39BQ13838 428 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 MPP2Q14168 576 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TMEM35AQ53FP2 167 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 PRAMEF9Q5VWM5 478 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms