RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 UNC5CO95185 931 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 CBX6O95503 412 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 IFI6P09912 130 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 SLC35E2P0CK97 266 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 CSNK2A2P19784 350 aaPredicted RBP7.51□□□□□ -1.21
COPS3-215ENST00000578317 GALNSP34059 522 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 XCR1P46094 333 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 RASSF2P50749 326 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 XKP51811 444 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 DGKQP52824 942 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 MAPK10P53779 464 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 SHC2P98077 582 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 MAT1AQ00266 395 aaKnown RBP7.51□□□□□ -1.21
COPS3-215ENST00000578317 SERTAD2Q14140 314 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 PUM1Q14671 1186 aaKnown RBP eCLIP7.51□□□□□ -1.21
COPS3-215ENST00000578317 MAPKAPK3Q16644 382 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 ZSCAN26Q16670 478 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 PRSS53Q2L4Q9 553 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 PGS1Q32NB8 556 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 ZNF385BQ569K4 471 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 FAM209AQ5JX71 171 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 ARHGAP40Q5TG30 622 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 C1orf189Q5VU69 101 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 FDX2Q6P4F2 183 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 QSOX2Q6ZRP7 698 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 SCUBE1Q8IWY4 988 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 MMP21Q8N119 569 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 CDC26Q8NHZ8 85 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 STT3BQ8TCJ2 826 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.51□□□□□ -1.21
COPS3-215ENST00000578317 UCN3Q969E3 161 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 VPS33AQ96AX1 596 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 NACC2Q96BF6 587 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 ANKRD9Q96BM1 317 aaPredicted RBP7.51□□□□□ -1.21
COPS3-215ENST00000578317 ROPN1LQ96C74 230 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 CNRIP1Q96F85 164 aaPredicted RBP7.51□□□□□ -1.21
COPS3-215ENST00000578317 ZBED6CLQ96FA7 236 aaPredicted RBP7.51□□□□□ -1.21
COPS3-215ENST00000578317 PEX11GQ96HA9 241 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 ITCHQ96J02 903 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 CSF3RQ99062 836 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 WDR54Q9H977 334 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 SERHLQ9NQF3 203 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 C14orf105Q9NVL8 296 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 IFT80Q9P2H3 777 aaPredicted RBP7.51□□□□□ -1.21
COPS3-215ENST00000578317 NXT1Q9UKK6 140 aaKnown RBP7.51□□□□□ -1.21
COPS3-215ENST00000578317 ERVK-11Q9UQG0 969 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 CLDN16Q9Y5I7 305 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 ZNF780BQ9Y6R6 833 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 SEC16AO15027 2179 aa7.51□□□□□ -1.21
COPS3-215ENST00000578317 SPTBN4Q9H254 2564 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 A0A1W2PRB8 838 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 GLOD5A6NK44 160 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 CDRT15L2A8MXV6 281 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 C9JVG2 144 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 NR5A2O00482 541 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 PCDH17O14917 1159 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 SLITRK5O94991 958 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 KRT16P08779 473 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 RAB40ALP0C0E4 278 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 ZGLP1P0C6A0 271 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 ZCCHC18P0CG32 403 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 PORP16435 677 aaPredicted RBP7.5□□□□□ -1.21
COPS3-215ENST00000578317 PTPN6P29350 595 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 RBMS1P29558 406 aaKnown RBP7.5□□□□□ -1.21
COPS3-215ENST00000578317 ALDH9A1P49189 494 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 GSK3AP49840 483 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 OCA2Q04671 838 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 SYT16Q17RD7 645 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 MMEL1Q495T6 779 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 TIGD2Q4W5G0 525 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 C3orf38Q5JPI3 329 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 PAGE3Q5JUK9 113 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 LRIF1Q5T3J3 769 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 OR4F3Q6IEY1 312 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 ANKRD26P1Q6NSI1 321 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 C8orf82Q6P1X6 216 aaPredicted RBP7.5□□□□□ -1.21
COPS3-215ENST00000578317 DLEU7Q6UYE1 221 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 CCDC121Q6ZUS5 278 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 TIPARPQ7Z3E1 657 aaKnown RBP7.5□□□□□ -1.21
COPS3-215ENST00000578317 ZNF227Q86WZ6 799 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 THNSL2Q86YJ6 484 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 ZC3H7AQ8IWR0 971 aaKnown RBP7.5□□□□□ -1.21
COPS3-215ENST00000578317 ST13P4Q8IZP2 240 aaPredicted RBP7.5□□□□□ -1.21
COPS3-215ENST00000578317 ESX1Q8N693 406 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 METTL27Q8N6F8 245 aaPredicted RBP7.5□□□□□ -1.21
COPS3-215ENST00000578317 TMEM52Q8NDY8 209 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 SLC45A3Q96JT2 553 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 AMDHD1Q96NU7 426 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 HOPXQ9BPY8 73 aaPredicted RBP7.5□□□□□ -1.21
COPS3-215ENST00000578317 AKIRIN1Q9H9L7 192 aaPredicted RBP7.5□□□□□ -1.21
COPS3-215ENST00000578317 PRTFDC1Q9NRG1 225 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 GIMAP4Q9NUV9 329 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 GID8Q9NWU2 228 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 TAS2R9Q9NYW1 312 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 NTMQ9P121 344 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 PCDHGB4Q9UN71 923 aa7.5□□□□□ -1.21
COPS3-215ENST00000578317 COL27A1Q8IZC6 1860 aaPredicted RBP7.5□□□□□ -1.21
COPS3-215ENST00000578317 A0A096LPI6 279 aa7.49□□□□□ -1.21
COPS3-215ENST00000578317 IGKV3D-11A0A0A0MRZ8 115 aa7.49□□□□□ -1.21
COPS3-215ENST00000578317 PMS2P1A4D2B8 440 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms