RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 VWA5B2Q8N398 1253 aa17.88■□□□□ 0.45
SS18-208ENST00000577751 SLC15A4Q8N697 577 aa17.88■□□□□ 0.45
SS18-208ENST00000577751 ZNF441Q8N8Z8 693 aa17.88■□□□□ 0.45
SS18-208ENST00000577751 TP53INP1Q96A56 240 aa17.88■□□□□ 0.45
SS18-208ENST00000577751 TMEM125Q96AQ2 219 aa17.88■□□□□ 0.45
SS18-208ENST00000577751 PPP3R2Q96LZ3 170 aa17.88■□□□□ 0.45
SS18-208ENST00000577751 BRINP2Q9C0B6 783 aa17.88■□□□□ 0.45
SS18-208ENST00000577751 CLMPQ9H6B4 373 aa17.88■□□□□ 0.45
SS18-208ENST00000577751 ARGLU1Q9NWB6 273 aaPredicted RBP17.88■□□□□ 0.45
SS18-208ENST00000577751 A8MVJ9 347 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 MYO1GB0I1T2 1018 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 CRYABP02511 175 aaKnown RBP17.87■□□□□ 0.45
SS18-208ENST00000577751 EDN3P14138 238 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 SDC1P18827 310 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 PTGER1P34995 402 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 UQCRFS1P47985 274 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 TDGF1P3P51864 188 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 DUSP8Q13202 625 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 LTB4RQ15722 352 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 GALNTL6Q49A17 601 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 ZNF628Q5EBL2 1059 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 LYPD8Q6UX82 237 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 IL20RBQ6UXL0 311 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 HDXQ7Z353 690 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 ADCY4Q8NFM4 1077 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 CDC26Q8NHZ8 85 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 NR4A3Q92570 626 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 ADIPOR1Q96A54 375 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 ZNF764Q96H86 408 aaPredicted RBP17.87■□□□□ 0.45
SS18-208ENST00000577751 PAIP2Q9BPZ3 127 aaKnown RBP17.87■□□□□ 0.45
SS18-208ENST00000577751 VIPAS39Q9H9C1 493 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 MIEF1Q9NQG6 463 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 GIMAP4Q9NUV9 329 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 OLAHQ9NV23 265 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 HPF1Q9NWY4 346 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 ERVK-11Q9UQG0 969 aa17.87■□□□□ 0.45
SS18-208ENST00000577751 KLF13Q9Y2Y9 288 aaPredicted RBP17.87■□□□□ 0.45
SS18-208ENST00000577751 PRRC2CQ9Y520 2896 aaKnown RBP17.87■□□□□ 0.45
SS18-208ENST00000577751 C2orf92A0A1B0GVN3 265 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 ATP6AP2A0A1C7CYW4 349 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 PEX11AO75192 247 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 SKAP2O75563 359 aaPredicted RBP17.86■□□□□ 0.45
SS18-208ENST00000577751 ATP6AP2O75787 350 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 CBX7O95931 251 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 JUNP05412 331 aaKnown RBP17.86■□□□□ 0.45
SS18-208ENST00000577751 BCKDHAP12694 445 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 MPIP34949 423 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 PMP22Q01453 160 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 BST1Q10588 318 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 MRPL49Q13405 166 aaKnown RBP17.86■□□□□ 0.45
SS18-208ENST00000577751 ZNF791Q3KP31 576 aaPredicted RBP17.86■□□□□ 0.45
SS18-208ENST00000577751 TRMT12Q53H54 448 aaKnown RBP17.86■□□□□ 0.45
SS18-208ENST00000577751 C6orf136Q5SQH8 315 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.86■□□□□ 0.45
SS18-208ENST00000577751 ST6GALNAC3Q8NDV1 305 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 SIMC1Q8NDZ2 872 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 C17orf47Q8NEP4 570 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 C16orf52Q8NHV5 167 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 SLC22A8Q8TCC7 542 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 ERP27Q96DN0 273 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 SGCZQ96LD1 299 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 FRMD6Q96NE9 622 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 GAL3ST4Q96RP7 486 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 SH3GL2Q99962 352 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 GIMAP2Q9UG22 337 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 ENTPD4Q9Y227 616 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 TENM4Q6N022 2769 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 EML6Q6ZMW3 1958 aa17.86■□□□□ 0.45
SS18-208ENST00000577751 TBX19O60806 448 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 MST1P26927 711 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 RPL14P50914 215 aaKnown RBP17.85■□□□□ 0.45
SS18-208ENST00000577751 MRPS35P82673 323 aaKnown RBP17.85■□□□□ 0.45
SS18-208ENST00000577751 ATP6AP1LQ52LC2 224 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 RTL4Q6ZR62 310 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 SULF2Q8IWU5 870 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 KIRREL3Q8IZU9 778 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 GOLM1Q8NBJ4 401 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 FAM98AQ8NCA5 519 aaKnown RBP17.85■□□□□ 0.45
SS18-208ENST00000577751 PSD4Q8NDX1 1056 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 OR9A2Q8NGT5 310 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 MGARPQ8TDB4 240 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 ATP6V1G3Q96LB4 118 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 TSSK3Q96PN8 268 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 TIMMDC1Q9NPL8 285 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 PFDN4Q9NQP4 134 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 NKIRAS1Q9NYS0 192 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 BAHCC1Q9P281 2608 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 BAIAP2L1Q9UHR4 511 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 CFL2Q9Y281 166 aa17.85■□□□□ 0.45
SS18-208ENST00000577751 CLEC18AA5D8T8 446 aa17.84■□□□□ 0.45
SS18-208ENST00000577751 ANKUB1A6NFN9 424 aa17.84■□□□□ 0.45
SS18-208ENST00000577751 KLRC4-KLRK1H3BQV0 150 aa17.84■□□□□ 0.45
SS18-208ENST00000577751 SNNO75324 88 aaPredicted RBP17.84■□□□□ 0.45
SS18-208ENST00000577751 BCAS2O75934 225 aaPredicted RBP17.84■□□□□ 0.45
SS18-208ENST00000577751 PCSK2P16519 638 aa17.84■□□□□ 0.45
SS18-208ENST00000577751 GPX3P22352 226 aa17.84■□□□□ 0.45
SS18-208ENST00000577751 ASMTP46597 345 aa17.84■□□□□ 0.45
SS18-208ENST00000577751 EMDP50402 254 aa17.84■□□□□ 0.45
SS18-208ENST00000577751 NR0B1P51843 470 aaKnown RBP17.84■□□□□ 0.45
SS18-208ENST00000577751 PDE7AQ13946 482 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms