RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 LAPTM5Q13571 262 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 CAPRIN1Q14444 709 aaKnown RBP9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 SETDB1Q15047 1291 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 SPRED3Q2MJR0 410 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 DEPDC1Q5TB30 811 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 ZNF474Q6S9Z5 364 aaPredicted RBP9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 ANGPTL8Q6UXH0 198 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 ZNF550Q7Z398 422 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 ADGRE4PQ86SQ3 457 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 ADAMTSL2Q86TH1 951 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 GPR180Q86V85 440 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 TRIM42Q8IWZ5 723 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 WNT2BQ93097 391 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 TP53INP1Q96A56 240 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 NTNG2Q96CW9 530 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 STARD4Q96DR4 205 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 ZC3HAV1LQ96H79 300 aaKnown RBP9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 TMEM41AQ96HV5 264 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 VPS39Q96JC1 886 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 TM9SF2Q99805 663 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 EFCAB11Q9BUY7 163 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 GSX2Q9BZM3 304 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 PIGMQ9H3S5 423 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 ZNF226Q9NYT6 803 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 FETUBQ9UGM5 382 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 PACSIN3Q9UKS6 424 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 CORO1CQ9ULV4 474 aaPredicted RBP9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 ROS1P08922 2347 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 A0A1W2PR48 441 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 OR6C76A6NM76 312 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 CCNT2O60583 730 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 SMNDC1O75940 238 aaKnown RBP eCLIP9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 ABCB1P08183 1280 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 CT62P0C5K7 136 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 CRYGSP22914 178 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 LOXP28300 417 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 TLX1P31314 330 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 CASP2P42575 452 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 TNFRSF17Q02223 184 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 TNK1Q13470 666 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 GAB1Q13480 694 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 PDK4Q16654 411 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 TMEM35AQ53FP2 167 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 PAGE2BQ5JRK9 111 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 KHDRBS2Q5VWX1 349 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 HLA-DQA1Q5Y7H0 255 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 ANKRD34AQ69YU3 496 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 ZC3HC1Q86WB0 502 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 OR7G3Q8NG95 312 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 ADIPOR1Q96A54 375 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 ZFP3Q96NJ6 502 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 FAM111AQ96PZ2 611 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 UCN2Q96RP3 112 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 NODALQ96S42 347 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 SECISBP2Q96T21 854 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 NAT9Q9BTE0 207 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 MED18Q9BUE0 208 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 SERHLQ9NQF3 203 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 SNX15Q9NRS6 342 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 MS4A12Q9NXJ0 267 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 MAPRE3Q9UPY8 281 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 CHMP2BQ9UQN3 213 aa9.18□□□□□ -0.94
NPLOC4-220ENST00000576940 A0A087X1B8 175 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 A0A1W2PNV4 684 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 DNALI1O14645 258 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 MSTNO14793 375 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 ICOSLGO75144 302 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 PIAS1O75925 651 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 C8BP07358 591 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 SLC35E2BP0CK96 405 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 SLC35E2P0CK97 266 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 ABCD3P28288 659 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 CD79BP40259 229 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 PTGDSP41222 190 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 RPS13P62277 151 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 DDX39BQ13838 428 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 OR4D1Q15615 310 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 TBCCQ15814 346 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 CYP1B1Q16678 543 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 KBTBD12Q3ZCT8 623 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 C10orf62Q5T681 223 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 SULT1C3Q6IMI6 304 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 MED27Q6P2C8 311 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 VWA1Q6PCB0 445 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 ENPP6Q6UWR7 440 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 C20orf204Q6ZNR8 217 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 PLEKHM3Q6ZWE6 761 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 BTLAQ7Z6A9 289 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 GPSM1Q86YR5 675 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 LAS2Q8IYD9 372 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 TCAIMQ8N3R3 496 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 ZNF615Q8N8J6 731 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 CNEP1R1Q8N9A8 125 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 WDSUB1Q8N9V3 476 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 OR14L1PQ8NHC6 308 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 RGMAQ96B86 450 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 CTHRC1Q96CG8 243 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 CMTM7Q96FZ5 175 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 PGM2Q96G03 612 aa9.17□□□□□ -0.94
NPLOC4-220ENST00000576940 MARK4Q96L34 752 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms