RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 UCK2Q9BZX2 261 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 DPH5Q9H2P9 285 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 RHOJQ9H4E5 214 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 TRIM45Q9H8W5 580 aaPredicted RBP5.77□□□□□ -1.49
NUP88-212ENST00000576708 DLL4Q9NR61 685 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 WWOXQ9NZC7 414 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 KCMF1Q9P0J7 381 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 MMACHCQ9Y4U1 282 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 ABCA12Q86UK0 2595 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 NKX2-6A6NCS4 301 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 ANKDD1BA6NHY2 528 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 E7ESA3 106 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 E9PLN8 166 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 SAP18O00422 153 aaKnown RBP5.76□□□□□ -1.49
NUP88-212ENST00000576708 CYR61O00622 381 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 PRRG2O14669 202 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 B3GALT2O43825 422 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 LDB3O75112 727 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 OR2J2O76002 312 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 ZFAND5O76080 213 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 MLYCDO95822 493 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 CD1DP15813 335 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 AGAP20933 346 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 SDHAP31040 664 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 SOX3P41225 446 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 HNMTP50135 292 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 SSR4P51571 173 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 SLC12A2P55011 1212 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 LIM2P55344 173 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 HSD17B7P56937 341 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 STXBP1P61764 594 aaKnown RBP5.76□□□□□ -1.49
NUP88-212ENST00000576708 DLG1Q12959 904 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 BMPR2Q13873 1038 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 FRG1Q14331 258 aaKnown RBP5.76□□□□□ -1.49
NUP88-212ENST00000576708 TGFBIQ15582 683 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 NIPAL1Q6NVV3 410 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 MEX3BQ6ZN04 569 aaKnown RBP5.76□□□□□ -1.49
NUP88-212ENST00000576708 ZNF793Q6ZN11 406 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 ADAMTSL2Q86TH1 951 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 GPSM1Q86YR5 675 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 CCDC71Q8IV32 467 aaPredicted RBP5.76□□□□□ -1.49
NUP88-212ENST00000576708 OR4N5Q8IXE1 308 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 TMEM156Q8N614 296 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 OR2L5Q8NG80 312 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 OR5M9Q8NGP3 310 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 C16orf52Q8NHV5 167 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 FAM57AQ8TBR7 257 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 PTPMT1Q8WUK0 201 aaPredicted RBP5.76□□□□□ -1.49
NUP88-212ENST00000576708 ANKRD7Q92527 254 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 VMP1Q96GC9 406 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 RASL10BQ96S79 203 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 MAPKAP1Q9BPZ7 522 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 VKORC1Q9BQB6 163 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 SORBS1Q9BX66 1292 aaKnown RBP5.76□□□□□ -1.49
NUP88-212ENST00000576708 NPLQ9BXD5 320 aaPredicted RBP5.76□□□□□ -1.49
NUP88-212ENST00000576708 ALOXE3Q9BYJ1 711 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 OR8D2Q9GZM6 311 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 DERL2Q9GZP9 239 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 REXO4Q9GZR2 422 aaKnown RBP5.76□□□□□ -1.49
NUP88-212ENST00000576708 MS4A5Q9H3V2 200 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 NT5DC2Q9H857 520 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 CLK4Q9HAZ1 481 aaKnown RBP5.76□□□□□ -1.49
NUP88-212ENST00000576708 SAYSD1Q9NPB0 183 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 SEMA4BQ9NPR2 832 aaPredicted RBP5.76□□□□□ -1.49
NUP88-212ENST00000576708 DNAJC11Q9NVH1 559 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 PYCARDQ9ULZ3 195 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 PPIEQ9UNP9 301 aaKnown RBP5.76□□□□□ -1.49
NUP88-212ENST00000576708 ERVK-11Q9UQG0 969 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 RNF6Q9Y252 685 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 KLF13Q9Y2Y9 288 aaPredicted RBP5.76□□□□□ -1.49
NUP88-212ENST00000576708 LIPGQ9Y5X9 500 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 OTOGQ6ZRI0 2925 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 NCOA6Q14686 2063 aaPredicted RBP5.76□□□□□ -1.49
NUP88-212ENST00000576708 CSMD2Q7Z408 3487 aa5.76□□□□□ -1.49
NUP88-212ENST00000576708 DBX1A6NMT0 343 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 WASHC1A8K0Z3 465 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 A8MVJ9 347 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 NPIPA2E9PIF3 369 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 NPIPA3F8WFD2 350 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 KLRC4-KLRK1H3BQV0 150 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 UBXN8O00124 270 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 CLDN4O14493 209 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 CCNT2O60583 730 aaKnown RBP5.75□□□□□ -1.49
NUP88-212ENST00000576708 CTNSO60931 367 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 PRKRAO75569 313 aaKnown RBP5.75□□□□□ -1.49
NUP88-212ENST00000576708 STK16O75716 305 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 ETHE1O95571 254 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 MPIG6BO95866 241 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 IL18BPO95998 194 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 C1QAP02745 245 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 PCNAP12004 261 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 TNNI3P19429 210 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 GGT5P36269 586 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 MSH2P43246 934 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 MTTPP55157 894 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 NUP107P57740 925 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 GPX6P59796 221 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 PPIAP62937 165 aaKnown RBP5.75□□□□□ -1.49
NUP88-212ENST00000576708 PLGLB1Q02325 96 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 TLE4Q04727 773 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms