RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 SOX8P57073 446 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 PHC1P78364 1004 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 MRPS35P82673 323 aaKnown RBP15.91■□□□□ 0.14
NUP88-210ENST00000574867 UBAP2LQ14157 1087 aaKnown RBP15.91■□□□□ 0.14
NUP88-210ENST00000574867 IRAK1BP1Q5VVH5 260 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 FAM111BQ6SJ93 734 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 TMEM107Q6UX40 140 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 RNF111Q6ZNA4 994 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 MTDHQ86UE4 582 aaKnown RBP15.91■□□□□ 0.14
NUP88-210ENST00000574867 BCAS4Q8TDM0 211 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 ELP5Q8TE02 316 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 APOBEC4Q8WW27 367 aaKnown RBP15.91■□□□□ 0.14
NUP88-210ENST00000574867 SPDL1Q96EA4 605 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 CCDC115Q96NT0 180 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 ZFHX4Q86UP3 3567 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 OR6C76A6NM76 312 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 PRAMEF2O60811 474 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 C6orf47O95873 294 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 ITGB2P05107 769 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 EFNA1P20827 205 aaPredicted RBP15.9■□□□□ 0.14
NUP88-210ENST00000574867 PTGER1P34995 402 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 MC3RP41968 323 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 MAPRE2Q15555 327 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 BORAQ6PGQ7 559 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 TMEM64Q6YI46 380 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 OR2L13Q8N349 312 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 CCDC197Q8NCU1 140 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 OR8K3Q8NH51 312 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 KAT2AQ92830 837 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 ELP4Q96EB1 424 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 LHPPQ9H008 270 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 DDX18Q9NVP1 670 aaKnown RBP15.9■□□□□ 0.14
NUP88-210ENST00000574867 TAS2R9Q9NYW1 312 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 CFL2Q9Y281 166 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 HRKO00198 91 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 COQ9O75208 318 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 S1PR1P21453 382 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 ITGA3P26006 1051 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 SOX18P35713 384 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 SLC37A1P57057 533 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 Q0VFX4 171 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 KLF10Q13118 480 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 MAPKAPK3Q16644 382 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 TRMT12Q53H54 448 aaKnown RBP15.9■□□□□ 0.14
NUP88-210ENST00000574867 FHL5Q5TD97 284 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 HSDL2Q6YN16 418 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 ANKRD46Q86W74 232 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 CLECL1Q8IZS7 167 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 GALNT16Q8N428 558 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 OR7G2Q8NG99 324 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 OR4A15Q8NGL6 344 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 MOAP1Q96BY2 351 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 NUDT9Q9BW91 350 aa15.9■□□□□ 0.14
NUP88-210ENST00000574867 TRBV11-1A0A0K0K1C0 115 aa15.89■□□□□ 0.13
NUP88-210ENST00000574867 CBX7O95931 251 aa15.89■□□□□ 0.13
NUP88-210ENST00000574867 SSTR4P31391 388 aa15.89■□□□□ 0.13
NUP88-210ENST00000574867 CDK9P50750 372 aaKnown RBP15.89■□□□□ 0.13
NUP88-210ENST00000574867 HBA1P69905 142 aa15.89■□□□□ 0.13
NUP88-210ENST00000574867 CHAF1BQ13112 559 aa15.89■□□□□ 0.13
NUP88-210ENST00000574867 ST3GAL2Q16842 350 aa15.89■□□□□ 0.13
NUP88-210ENST00000574867 GK5Q6ZS86 529 aa15.89■□□□□ 0.13
NUP88-210ENST00000574867 VPS33AQ96AX1 596 aa15.89■□□□□ 0.13
NUP88-210ENST00000574867 THOC3Q96J01 351 aaKnown RBP15.89■□□□□ 0.13
NUP88-210ENST00000574867 ITCHQ96J02 903 aa15.89■□□□□ 0.13
NUP88-210ENST00000574867 SLC25A23Q9BV35 468 aa15.89■□□□□ 0.13
NUP88-210ENST00000574867 MYLK2Q9H1R3 596 aa15.89■□□□□ 0.13
NUP88-210ENST00000574867 OR10A5Q9H207 317 aa15.89■□□□□ 0.13
NUP88-210ENST00000574867 C3orf14Q9HBI5 128 aa15.89■□□□□ 0.13
NUP88-210ENST00000574867 SIRT3Q9NTG7 399 aaPredicted RBP15.89■□□□□ 0.13
NUP88-210ENST00000574867 ZNF223Q9UK11 482 aaPredicted RBP15.89■□□□□ 0.13
NUP88-210ENST00000574867 C19orf53Q9UNZ5 99 aaPredicted RBP15.89■□□□□ 0.13
NUP88-210ENST00000574867 MAP1BP46821 2468 aaKnown RBP15.89■□□□□ 0.13
NUP88-210ENST00000574867 A0A1W2PP18 115 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 MASP2O00187 686 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 CLPSP04118 112 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 CELA2AP08217 269 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 SNRPB2P08579 225 aaKnown RBP15.88■□□□□ 0.13
NUP88-210ENST00000574867 ITGAMP11215 1152 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 CAPN3P20807 821 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 PRR5P85299 388 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 SLC29A4Q7RTT9 530 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 ZNF321PQ8N8H1 164 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 ZNF615Q8N8J6 731 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 GOT1L1Q8NHS2 421 aaPredicted RBP15.88■□□□□ 0.13
NUP88-210ENST00000574867 SFXN5Q8TD22 340 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 DOK4Q8TEW6 326 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 PANX1Q96RD7 426 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 DEFB126Q9BYW3 111 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 PRORYQ9H606 182 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 SLC52A3Q9NQ40 469 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 NTMQ9P121 344 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 ARMCX1Q9P291 453 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 PRODH2Q9UF12 536 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 BCAP29Q9UHQ4 241 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 UPK1AO00322 258 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 ZFAND5O76080 213 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 ABCB1P08183 1280 aaPredicted RBP15.88■□□□□ 0.13
NUP88-210ENST00000574867 EXOSC7Q15024 291 aaKnown RBP15.88■□□□□ 0.13
NUP88-210ENST00000574867 VPS26BQ4G0F5 336 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 GPR155Q7Z3F1 870 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms