RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 LANCL3Q6ZV70 420 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 GPR155Q7Z3F1 870 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 IFNEQ86WN2 208 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 RNF130Q86XS8 419 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 OR10A6Q8NH74 314 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 RIT1Q92963 219 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 NEURL3Q96EH8 262 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 SLC46A1Q96NT5 459 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 ECSITQ9BQ95 431 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 KAT8Q9H7Z6 458 aaKnown RBP22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 CXorf21Q9HAI6 301 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 PNO1Q9NRX1 252 aaKnown RBP22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 CD300AQ9UGN4 299 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 USP22Q9UPT9 525 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 KNTC1P50748 2209 aa22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 SDHBP21912 280 aa22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 PPIBP23284 216 aaKnown RBP22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 SLC5A2P31639 672 aa22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 GSK3BP49841 420 aa22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 RPS26P62854 115 aaKnown RBP22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 SDK2Q58EX2 2172 aa22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 COX20Q5RI15 118 aa22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 C6orf120Q7Z4R8 191 aa22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 GALNT12Q8IXK2 581 aa22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 SFXN5Q8TD22 340 aa22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 ZNF675Q8TD23 568 aa22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 ALG2Q9H553 416 aa22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 C3orf14Q9HBI5 128 aa22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 DDX18Q9NVP1 670 aaKnown RBP22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 GPATCH2Q9NW75 528 aa22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 SLC7A8Q9UHI5 535 aa22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 C3orf18Q9UK00 162 aa22.47■■□□□ 1.19
ATPAF1-213ENST00000574428 A8MUA0 341 aa22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 UPK1AO00322 258 aa22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 PLOD2O00469 737 aa22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 EMC8O43402 210 aa22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 NME6O75414 186 aaPredicted RBP22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 KRT75O95678 551 aa22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 SOX11P35716 441 aa22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 MVDP53602 400 aa22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 PRR5P85299 388 aa22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 KPNB1Q14974 876 aaKnown RBP22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 FHL5Q5TD97 284 aa22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 VWA5B2Q8N398 1253 aa22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 PLPP5Q8NEB5 264 aa22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 WDR60Q8WVS4 1066 aa22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 MESP1Q9BRJ9 268 aa22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 CRB3Q9BUF7 120 aa22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 NXT1Q9UKK6 140 aaKnown RBP22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 GMEB1Q9Y692 573 aa22.46■■□□□ 1.19
ATPAF1-213ENST00000574428 HRKO00198 91 aa22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 ENTPD5O75356 428 aa22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 GPX2P18283 190 aa22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 TNNI3P19429 210 aa22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 PGDP52209 483 aa22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 EMP2P54851 167 aa22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 EEFSECP57772 596 aaKnown RBP22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 BIKQ13323 160 aa22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 OR2L13Q8N349 312 aa22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 NUP43Q8NFH3 380 aa22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 OR56A1Q8NGH5 318 aa22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 OR52N2Q8NGI0 321 aa22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 CT55Q8WUE5 264 aa22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 CTHRC1Q96CG8 243 aa22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 PELOQ9BRX2 385 aaKnown RBP22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 EQTNQ9NQ60 294 aa22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 PTGFRNQ9P2B2 879 aa22.45■■□□□ 1.19
ATPAF1-213ENST00000574428 RBMS1P29558 406 aaKnown RBP22.45■■□□□ 1.18
ATPAF1-213ENST00000574428 CRATP43155 626 aa22.45■■□□□ 1.18
ATPAF1-213ENST00000574428 MAP4K2Q12851 820 aa22.45■■□□□ 1.18
ATPAF1-213ENST00000574428 EXOSC7Q15024 291 aaKnown RBP22.45■■□□□ 1.18
ATPAF1-213ENST00000574428 RGNQ15493 299 aa22.45■■□□□ 1.18
ATPAF1-213ENST00000574428 ENDOVQ8N8Q3 282 aaKnown RBP22.45■■□□□ 1.18
ATPAF1-213ENST00000574428 MOAP1Q96BY2 351 aa22.45■■□□□ 1.18
ATPAF1-213ENST00000574428 ZNF583Q96ND8 569 aa22.45■■□□□ 1.18
ATPAF1-213ENST00000574428 KCTD14Q9BQ13 255 aaPredicted RBP22.45■■□□□ 1.18
ATPAF1-213ENST00000574428 B3GNT4Q9C0J1 378 aa22.45■■□□□ 1.18
ATPAF1-213ENST00000574428 CORO2BQ9UQ03 480 aa22.45■■□□□ 1.18
ATPAF1-213ENST00000574428 PTRH2Q9Y3E5 179 aaKnown RBP22.45■■□□□ 1.18
ATPAF1-213ENST00000574428 C17orf105B2RV13 164 aa22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 PLOD3O60568 738 aa22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 ALOX12BO75342 701 aa22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 SLITRK5O94991 958 aa22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 ETFAP13804 333 aa22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 ME2P23368 584 aa22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 ZNF267Q14586 743 aaPredicted RBP22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 CYP51A1Q16850 503 aa22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 C6orf163Q5TEZ5 329 aa22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 ESX1Q8N693 406 aa22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 PTPMT1Q8WUK0 201 aaPredicted RBP22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 SLC35G5Q96KT7 338 aa22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 CNPPD1Q9BV87 410 aa22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 SERHL2Q9H4I8 314 aa22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 ADAP2Q9NPF8 381 aa22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 NTMQ9P121 344 aa22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 CCDC88CQ9P219 2028 aa22.44■■□□□ 1.18
ATPAF1-213ENST00000574428 KLF7O75840 302 aaPredicted RBP22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 HMGN2P05204 90 aaKnown RBP22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 HSD17B1P14061 328 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 TCN2P20062 427 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms