RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ATG4BQ9Y4P1 393 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 N6AMT1Q9Y5N5 214 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 A0A1B0GTQ1 180 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 C2orf92A0A1B0GVN3 265 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 ARNTLO00327 626 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 RNASET2O00584 256 aaKnown RBP9.54□□□□□ -0.88
SMG6-213ENST00000573166 PRAMEF10O60809 474 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 CPMP14384 443 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 AHCYP23526 432 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 SLC5A2P31639 672 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 KDELR2P33947 212 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 TNFRSF17Q02223 184 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 DMWDQ09019 674 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 GAS6Q14393 721 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 SGCBQ16585 318 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 COQ5Q5HYK3 327 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 CDRT4Q8N9R6 151 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 DEFB124Q8NES8 71 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 ABHD11Q8NFV4 315 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 OR52N2Q8NGI0 321 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 SLC25A36Q96CQ1 311 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 MRPL48Q96GC5 212 aaKnown RBP9.54□□□□□ -0.88
SMG6-213ENST00000573166 TRAPPC9Q96Q05 1148 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 GPATCH1Q9BRR8 931 aaKnown RBP9.54□□□□□ -0.88
SMG6-213ENST00000573166 C1QTNF3Q9BXJ4 246 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 ACTRT3Q9BYD9 372 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 KLHL31Q9H511 634 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 C2orf42Q9NWW7 574 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 MED16Q9Y2X0 877 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 NSG1A0A0A6YYJ2 146 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 CCNB2O95067 398 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 EPHA4P54764 986 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 EXOSC7Q15024 291 aaKnown RBP9.54□□□□□ -0.88
SMG6-213ENST00000573166 PDK3Q15120 406 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 CYP27C1Q4G0S4 372 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 CWF19L1Q69YN2 538 aaKnown RBP9.54□□□□□ -0.88
SMG6-213ENST00000573166 CLEC1AQ8NC01 280 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 OR52E4Q8NGH9 312 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 BBS10Q8TAM1 723 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 DIO2Q92813 273 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 MAL2Q969L2 176 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 MS4A6EQ96DS6 147 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 CCDC74BQ96LY2 380 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 MS4A4EQ96PG1 132 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 MKKSQ9NPJ1 570 aaPredicted RBP9.54□□□□□ -0.88
SMG6-213ENST00000573166 KCMF1Q9P0J7 381 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 BTNL2Q9UIR0 455 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 PCDHA9Q9Y5H5 950 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 CEP250Q9BV73 2442 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 ACACAQ13085 2346 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 IGHV1OR21-1A0A087WYE8 117 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 AK1P00568 194 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 C1QAP02745 245 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 RETP07949 1114 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 IGFBP5P24593 272 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 CD1CP29017 333 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 KLHL12Q53G59 568 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 SFT2D3Q587I9 215 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 ADNP2Q6IQ32 1131 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 ALKBH2Q6NS38 261 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 LRRC69Q6ZNQ3 347 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 CBR4Q8N4T8 237 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 FAM98AQ8NCA5 519 aaKnown RBP9.54□□□□□ -0.88
SMG6-213ENST00000573166 OR5T3Q8NGG3 340 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 OR4C6Q8NH72 309 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 ZHX1-C8orf76Q96EF9 292 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 SMAD5Q99717 465 aaKnown RBP9.54□□□□□ -0.88
SMG6-213ENST00000573166 VAPAQ9P0L0 249 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 DNAJB9Q9UBS3 223 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 IFT52Q9Y366 437 aa9.54□□□□□ -0.88
SMG6-213ENST00000573166 TNFRSF10AO00220 468 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 PRKRAO75569 313 aaKnown RBP9.53□□□□□ -0.88
SMG6-213ENST00000573166 SP9P0CG40 484 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 HSMCR30P0CW71 290 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 OR1E2P47887 323 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 TARDBPQ13148 414 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMG6-213ENST00000573166 AGERQ15109 404 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 WDR36Q8NI36 951 aaKnown RBP9.53□□□□□ -0.88
SMG6-213ENST00000573166 TESCQ96BS2 214 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 TMCO6Q96DC7 493 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 TMEM19Q96HH6 336 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 DCUN1D5Q9BTE7 237 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 LDAHQ9H6V9 325 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 ETAA1Q9NY74 926 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 LOXL2Q9Y4K0 774 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 TANC1Q9C0D5 1861 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 SPTBP11277 2137 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 HRO43593 1189 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 H1F0P07305 194 aaKnown RBP9.53□□□□□ -0.88
SMG6-213ENST00000573166 GP1BBP13224 206 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 YBX1P67809 324 aaKnown RBP9.53□□□□□ -0.88
SMG6-213ENST00000573166 EEF1A2Q05639 463 aaKnown RBP9.53□□□□□ -0.88
SMG6-213ENST00000573166 C1DQ13901 141 aaKnown RBP9.53□□□□□ -0.88
SMG6-213ENST00000573166 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.53□□□□□ -0.88
SMG6-213ENST00000573166 CCDC92Q53HC0 331 aaPredicted RBP9.53□□□□□ -0.88
SMG6-213ENST00000573166 ADGRF3Q8IZF5 1079 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 DEPDC4Q8N2C3 294 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 ASB15Q8WXK1 588 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 PYURFQ96I23 114 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 MCHR1Q99705 422 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms