RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 HSD17B3P37058 310 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 ARL1P40616 181 aaPredicted RBP16.61■□□□□ 0.25
CHD3-214ENST00000572579 CCNYL2Q5T2Q4 361 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 B3GNT6Q6ZMB0 384 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 GALNT12Q8IXK2 581 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 PRR22Q8IZ63 422 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 OR10Q1Q8NGQ4 319 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 SPPL2AQ8TCT8 520 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 ZNF592Q92610 1267 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 JSRP1Q96MG2 331 aaPredicted RBP16.61■□□□□ 0.25
CHD3-214ENST00000572579 ZNF681Q96N22 645 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 MRPL46Q9H2W6 279 aaKnown RBP16.61■□□□□ 0.25
CHD3-214ENST00000572579 UBQLN3Q9H347 655 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 LDAHQ9H6V9 325 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 WDR41Q9HAD4 459 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 ALKBH4Q9NXW9 302 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 TMEM216Q9P0N5 145 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 ZNF639Q9UID6 485 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 ITGB1BP2Q9UKP3 347 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 NPFFR2Q9Y5X5 522 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 INTS1Q8N201 2190 aaKnown RBP16.61■□□□□ 0.25
CHD3-214ENST00000572579 DLX3O60479 287 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 SMIM24O75264 130 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 KRT38O76015 456 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 HOXD4P09016 255 aaPredicted RBP16.6■□□□□ 0.25
CHD3-214ENST00000572579 FEN1P39748 380 aaKnown RBP16.6■□□□□ 0.25
CHD3-214ENST00000572579 WNT3P56703 355 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 IFT88Q13099 833 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 TSNAXIP1Q2TAA8 658 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 PRICKLE4Q2TBC4 344 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 TTC19Q6DKK2 380 aaPredicted RBP16.6■□□□□ 0.25
CHD3-214ENST00000572579 SLC48A1Q6P1K1 146 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 TIFABQ6ZNK6 161 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 NEIL3Q8TAT5 605 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 TRPC4APQ8TEL6 797 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 SARAFQ96BY9 339 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 GNRHR2Q96P88 292 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 DOHHQ9BU89 302 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 ANGPTL4Q9BY76 406 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 NXF5Q9H1B4 397 aaKnown RBP16.6■□□□□ 0.25
CHD3-214ENST00000572579 MAT2BQ9NZL9 334 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 HEY2Q9UBP5 337 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 TMCO1Q9UM00 188 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 BOKQ9UMX3 212 aaPredicted RBP16.6■□□□□ 0.25
CHD3-214ENST00000572579 SLC12A4Q9UP95 1085 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 NINQ8N4C6 2090 aa16.6■□□□□ 0.25
CHD3-214ENST00000572579 NCKAP5O14513 1909 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 FIGNL2A6NMB9 653 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 NME6O75414 186 aaPredicted RBP16.59■□□□□ 0.25
CHD3-214ENST00000572579 OR4F21O95013 312 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 ABCB1P08183 1280 aaPredicted RBP16.59■□□□□ 0.25
CHD3-214ENST00000572579 CTAGE8P0CG41 777 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 PORP16435 677 aaPredicted RBP16.59■□□□□ 0.25
CHD3-214ENST00000572579 NT5EP21589 574 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 GPX3P22352 226 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 CASP3P42574 277 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 MAPK12P53778 367 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 MAP4K2Q12851 820 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 SNTB1Q13884 538 aaKnown RBP16.59■□□□□ 0.25
CHD3-214ENST00000572579 EXOSC7Q15024 291 aaKnown RBP16.59■□□□□ 0.25
CHD3-214ENST00000572579 C1orf185Q5T7R7 199 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 CTAGE4Q8IX94 777 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 ULK2Q8IYT8 1036 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 DND1Q8IYX4 353 aaKnown RBP16.59■□□□□ 0.25
CHD3-214ENST00000572579 TAGAPQ8N103 731 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 NAXEQ8NCW5 288 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 ADCY4Q8NFM4 1077 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 CHTF18Q8WVB6 975 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 DIO2Q92813 273 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 CTHRC1Q96CG8 243 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 RILPQ96NA2 401 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 TSPYL1Q9H0U9 437 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 EPB41L4BQ9H329 900 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 ELOVL6Q9H5J4 265 aa16.59■□□□□ 0.25
CHD3-214ENST00000572579 A0A087WUV0 522 aaPredicted RBP16.58■□□□□ 0.24
CHD3-214ENST00000572579 MANBAO00462 879 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 WDR1O75083 606 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 CBX7O95931 251 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 OTCP00480 354 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 SNRPAP09012 282 aaKnown RBP16.58■□□□□ 0.24
CHD3-214ENST00000572579 FAM153BP0C7A2 387 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 CNTFP26441 200 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 PTGDSP41222 190 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 ZFP36L2P47974 494 aaKnown RBP16.58■□□□□ 0.24
CHD3-214ENST00000572579 RAE1P78406 368 aaKnown RBP16.58■□□□□ 0.24
CHD3-214ENST00000572579 CLCQ05315 142 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 RPS6KA2Q15349 733 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 LTB4RQ15722 352 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 NNATQ16517 81 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 FAM153CQ494X1 144 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 GLE1Q53GS7 698 aaKnown RBP16.58■□□□□ 0.24
CHD3-214ENST00000572579 TRMT12Q53H54 448 aaKnown RBP16.58■□□□□ 0.24
CHD3-214ENST00000572579 ZNF678Q5SXM1 525 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 C10orf62Q5T681 223 aaPredicted RBP16.58■□□□□ 0.24
CHD3-214ENST00000572579 WLSQ5T9L3 541 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 POMZP3Q6PJE2 187 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 C1orf52Q8N6N3 182 aaKnown RBP16.58■□□□□ 0.24
CHD3-214ENST00000572579 MYRIPQ8NFW9 859 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 OR7G1Q8NGA0 311 aa16.58■□□□□ 0.24
CHD3-214ENST00000572579 SELENOMQ8WWX9 145 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms