RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 THAP3Q8WTV1 239 aaPredicted RBP8.03□□□□□ -1.12
SMG6-210ENST00000572205 RNF138Q8WVD3 245 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 DAZLQ92904 295 aaKnown RBP8.03□□□□□ -1.12
SMG6-210ENST00000572205 ADIPOR1Q96A54 375 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 ZBTB9Q96C00 473 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 TLCD1Q96CP7 247 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 PGM2Q96G03 612 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 C3orf30Q96M34 536 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 SORT1Q99523 831 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 TRMOQ9BU70 441 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 EBPLQ9BY08 206 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 SHCBP1LQ9BZQ2 653 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 WWTR1Q9GZV5 400 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 ZNF395Q9H8N7 513 aaPredicted RBP8.03□□□□□ -1.12
SMG6-210ENST00000572205 ZFAND3Q9H8U3 227 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 NPHS2Q9NP85 383 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 RRAGDQ9NQL2 400 aaPredicted RBP8.03□□□□□ -1.12
SMG6-210ENST00000572205 GIMAP2Q9UG22 337 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 ERRFI1Q9UJM3 462 aaPredicted RBP8.03□□□□□ -1.12
SMG6-210ENST00000572205 HAO1Q9UJM8 370 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 ERVK-19Q9WJR5 959 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 COPG1Q9Y678 874 aaKnown RBP8.03□□□□□ -1.12
SMG6-210ENST00000572205 NAV2Q8IVL1 2488 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 MED12Q93074 2177 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 AKAP9Q99996 3911 aa8.02□□□□□ -1.12
SMG6-210ENST00000572205 C1orf226A1L170 272 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 CCDC151A5D8V7 595 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 WWP2O00308 870 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 ITM2AO43736 263 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 LYPLA1O75608 230 aaPredicted RBP8.02□□□□□ -1.13
SMG6-210ENST00000572205 GLSO94925 669 aaPredicted RBP8.02□□□□□ -1.13
SMG6-210ENST00000572205 LDLRP01130 860 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 SP1P08047 785 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 FGF4P08620 206 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 UROSP10746 265 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 SDC1P18827 310 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 ATF4P18848 351 aaPredicted RBP8.02□□□□□ -1.13
SMG6-210ENST00000572205 GPX3P22352 226 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 HMOX2P30519 316 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 ARL1P40616 181 aaPredicted RBP8.02□□□□□ -1.13
SMG6-210ENST00000572205 IDH3AP50213 366 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 WDR4P57081 412 aaKnown RBP8.02□□□□□ -1.13
SMG6-210ENST00000572205 TAS2R50P59544 299 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 NAA20P61599 178 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 FOXO1Q12778 655 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 STX4Q12846 297 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 PDE7AQ13946 482 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 KRT71Q3SY84 523 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 C4orf17Q53FE4 359 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 ZNF385BQ569K4 471 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 SPIN4Q56A73 249 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 ARL13AQ5H913 290 aaPredicted RBP8.02□□□□□ -1.13
SMG6-210ENST00000572205 CCNYL2Q5T2Q4 361 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 TTC19Q6DKK2 380 aaPredicted RBP8.02□□□□□ -1.13
SMG6-210ENST00000572205 FAM111BQ6SJ93 734 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 LRIG3Q6UXM1 1119 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 HSDL2Q6YN16 418 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 ZFP62Q8NB50 900 aaPredicted RBP8.02□□□□□ -1.13
SMG6-210ENST00000572205 ZNF675Q8TD23 568 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 C16orf78Q8WTQ4 265 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 ZNF764Q96H86 408 aaPredicted RBP8.02□□□□□ -1.13
SMG6-210ENST00000572205 EGLN2Q96KS0 407 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 DGAT2Q96PD7 388 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 PSMG3-AS1Q96PY0 264 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 UTP23Q9BRU9 249 aaKnown RBP8.02□□□□□ -1.13
SMG6-210ENST00000572205 CENPKQ9BS16 269 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 DEFB126Q9BYW3 111 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 ANKRA2Q9H9E1 313 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 MYNNQ9NPC7 610 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 KLHL1Q9NR64 748 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 SENP1Q9P0U3 644 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 LRFN1Q9P244 771 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 TEKT2Q9UIF3 430 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 ACTL7BQ9Y614 415 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 CHCHD2Q9Y6H1 151 aaPredicted RBP8.02□□□□□ -1.13
SMG6-210ENST00000572205 CLCA3PQ9Y6N3 262 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 SPACA6W5XKT8 324 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 PDZD2O15018 2839 aa8.02□□□□□ -1.13
SMG6-210ENST00000572205 NUP214P35658 2090 aaPredicted RBP8.01□□□□□ -1.13
SMG6-210ENST00000572205 ABCA12Q86UK0 2595 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 LRRC3CA6NJW4 275 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 H3BQF6 201 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 AZIN1O14977 448 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 PIP5K1BO14986 540 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 ZNHIT1O43257 154 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 CTIFO43310 598 aaKnown RBP8.01□□□□□ -1.13
SMG6-210ENST00000572205 NME6O75414 186 aaPredicted RBP8.01□□□□□ -1.13
SMG6-210ENST00000572205 ZFAND5O76080 213 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 IFNA16P05015 189 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 RPLP1P05386 114 aaKnown RBP8.01□□□□□ -1.13
SMG6-210ENST00000572205 STSP08842 583 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 CCL3P10147 92 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 DEKP35659 375 aaKnown RBP8.01□□□□□ -1.13
SMG6-210ENST00000572205 FRKP42685 505 aaPredicted RBP8.01□□□□□ -1.13
SMG6-210ENST00000572205 CYB561P49447 251 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 EMDP50402 254 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 KCNK10P57789 538 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 MRPS35P82673 323 aaKnown RBP8.01□□□□□ -1.13
SMG6-210ENST00000572205 IFFO1Q0D2I5 559 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 ZNF763Q0D2J5 394 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms