RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 ATP6AP1LQ52LC2 224 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 ABHD17BQ5VST6 288 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 IRAK1BP1Q5VVH5 260 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 TMEM198Q66K66 360 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 HSDL2Q6YN16 418 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 LARP4Q71RC2 724 aaKnown RBP eCLIP6.47□□□□□ -1.37
SMG6-209ENST00000571442 ZNF551Q7Z340 670 aaPredicted RBP6.47□□□□□ -1.37
SMG6-209ENST00000571442 MDGA2Q7Z553 956 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 GALNT12Q8IXK2 581 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 RIMKLAQ8IXN7 391 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 LRRC25Q8N386 305 aaPredicted RBP6.47□□□□□ -1.37
SMG6-209ENST00000571442 ZADH2Q8N4Q0 377 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 CISD2Q8N5K1 135 aaKnown RBP6.47□□□□□ -1.37
SMG6-209ENST00000571442 SLC5A8Q8N695 610 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 ZNF441Q8N8Z8 693 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 FNDC5Q8NAU1 212 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 OR7G2Q8NG99 324 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 OR7A2PQ8NGA2 310 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 C16orf52Q8NHV5 167 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 CKAP2Q8WWK9 683 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 ADIPOR1Q96A54 375 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 PNPLA2Q96AD5 504 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 SNRNP40Q96DI7 357 aaKnown RBP6.47□□□□□ -1.37
SMG6-209ENST00000571442 RBM18Q96H35 190 aaKnown RBP6.47□□□□□ -1.37
SMG6-209ENST00000571442 METTL2AQ96IZ6 378 aaKnown RBP6.47□□□□□ -1.37
SMG6-209ENST00000571442 MARK4Q96L34 752 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 TEX37Q96LM6 180 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 ZNF354BQ96LW1 612 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 PPP3R2Q96LZ3 170 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 OR52B2Q96RD2 323 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 TAAR6Q96RI8 345 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 RASL10BQ96S79 203 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 BRINP2Q9C0B6 783 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 OR10A5Q9H207 317 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 REEP4Q9H6H4 257 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 EPS8L2Q9H6S3 715 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 MEAF6Q9HAF1 191 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 TAS2R7Q9NYW3 318 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 EHD3Q9NZN3 535 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 MAP10Q9P2G4 905 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 MYOTQ9UBF9 498 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 ANAPC2Q9UJX6 822 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 ERVK-11Q9UQG0 969 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 B3GNT3Q9Y2A9 372 aa6.47□□□□□ -1.37
SMG6-209ENST00000571442 NBPF19A0A087WUL8 3843 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 PINLYPA6NC86 204 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 SCAMP2O15127 329 aaKnown RBP6.46□□□□□ -1.38
SMG6-209ENST00000571442 TBX19O60806 448 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 LAMP1P11279 417 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 COX7A2P14406 83 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 GPX3P22352 226 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 IL12AP29459 219 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 TRHRP34981 398 aaPredicted RBP6.46□□□□□ -1.38
SMG6-209ENST00000571442 MC3RP41968 323 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 FRKP42685 505 aaPredicted RBP6.46□□□□□ -1.38
SMG6-209ENST00000571442 EMDP50402 254 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 NCBP2P52298 156 aaKnown RBP eCLIP6.46□□□□□ -1.38
SMG6-209ENST00000571442 WNT3P56703 355 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 TLE1Q04724 770 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 EMX2Q04743 252 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 MAP4K2Q12851 820 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 ZNF169Q14929 603 aaPredicted RBP6.46□□□□□ -1.38
SMG6-209ENST00000571442 OR1C1Q15619 314 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 NNATQ16517 81 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 PIGGQ5H8A4 983 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 ATG16L1Q676U5 607 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 TMEM107Q6UX40 140 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 NPSR1Q6W5P4 371 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 RNF111Q6ZNA4 994 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 FAM47EQ6ZV65 393 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 IKBIPQ70UQ0 350 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 WDR53Q7Z5U6 358 aaPredicted RBP6.46□□□□□ -1.38
SMG6-209ENST00000571442 PRR22Q8IZ63 422 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 LGI4Q8N135 537 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 VWA5B2Q8N398 1253 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 OR52R1Q8NGF1 315 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 OR8K3Q8NH51 312 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 NUBPLQ8TB37 319 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 RAB3IL1Q8TBN0 382 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 ZNF675Q8TD23 568 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 THOC1Q96FV9 657 aaKnown RBP6.46□□□□□ -1.38
SMG6-209ENST00000571442 SCMH1Q96GD3 660 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 MAELQ96JY0 434 aaKnown RBP6.46□□□□□ -1.38
SMG6-209ENST00000571442 C7orf26Q96N11 449 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 AMDHD1Q96NU7 426 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 GAL3ST4Q96RP7 486 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 EBF4Q9BQW3 602 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 PELOQ9BRX2 385 aaKnown RBP6.46□□□□□ -1.38
SMG6-209ENST00000571442 ITPAQ9BY32 194 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 WWTR1Q9GZV5 400 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 RNF32Q9H0A6 362 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.46□□□□□ -1.38
SMG6-209ENST00000571442 NXF5Q9H1B4 397 aaKnown RBP6.46□□□□□ -1.38
SMG6-209ENST00000571442 TRIM45Q9H8W5 580 aaPredicted RBP6.46□□□□□ -1.38
SMG6-209ENST00000571442 MIEF1Q9NQG6 463 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 PFDN4Q9NQP4 134 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 KLHL1Q9NR64 748 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 SIRT3Q9NTG7 399 aaPredicted RBP6.46□□□□□ -1.38
SMG6-209ENST00000571442 DEPPQ9NTK1 212 aa6.46□□□□□ -1.38
SMG6-209ENST00000571442 INTS9Q9NV88 658 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms