RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PRKAA2P54646 552 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 PKNOX1P55347 436 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SLC29A2Q14542 456 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SLC10A1Q14973 349 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 RPS6KA2Q15349 733 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 PRICKLE4Q2TBC4 344 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 GXYLT1Q4G148 440 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 C3P1Q6ZMU1 363 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 GBP7Q8N8V2 638 aaPredicted RBP15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 OR10G3Q8NGC4 313 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 CHTF18Q8WVB6 975 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 CTHRC1Q96CG8 243 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 C11orf24Q96F05 449 aaPredicted RBP15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SHCBP1LQ9BZQ2 653 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 OR10A5Q9H207 317 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 PPCSQ9HAB8 311 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SIRT5Q9NXA8 310 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 MCM8Q9UJA3 840 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 CFL2Q9Y281 166 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 TACC2O95359 2948 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 LRRC3CA6NJW4 275 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 G3V3Y1 287 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 C19orf84I3L1E1 186 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 MANBAO00462 879 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 TP53I11O14683 189 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 WDR1O75083 606 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 TRIM3O75382 744 aaPredicted RBP15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 PDE9AO76083 593 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SUPT7LO94864 414 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 ENO1P06733 434 aaKnown RBP15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 FAM153BP0C7A2 387 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 NAGAP17050 411 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 ACVR2AP27037 513 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 CHRNB4P30926 498 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 PIGAP37287 484 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 GSTM5P46439 218 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 NR0B1P51843 470 aaKnown RBP15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 MGAT2Q10469 447 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 LCP2Q13094 533 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 FAM153CQ494X1 144 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 GALNT18Q6P9A2 607 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SH2D5Q6ZV89 423 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 LILRB4Q8NHJ6 448 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 CA5BP1Q8WTZ4 195 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SREK1Q8WXA9 508 aaKnown RBP15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 RND1Q92730 232 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SARAFQ96BY9 339 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SDCCAG3Q96C92 435 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 ERP27Q96DN0 273 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 CCDC126Q96EE4 140 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 C14orf79Q96F83 325 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 DCDC2Q9UHG0 476 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 PSME2Q9UL46 239 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 NPFFR2Q9Y5X5 522 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 LIPGQ9Y5X9 500 aa15.71■□□□□ 0.11
MAP1LC3B-208ENST00000570189 INTS1Q8N201 2190 aaKnown RBP15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 H3BQF6 201 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 CDH16O75309 829 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 ULK1O75385 1050 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 CSNK2A2P19784 350 aaPredicted RBP15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 GPX3P22352 226 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 SOX18P35713 384 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 KIR3DL1P43629 444 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 MAN2A2P49641 1150 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 NRG3P56975 720 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 KCNJ2P63252 427 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 TFF3Q07654 80 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 SGO1Q5FBB7 561 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 C6orf163Q5TEZ5 329 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 GPRIN3Q6ZVF9 776 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 VWA5B2Q8N398 1253 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 C1orf52Q8N6N3 182 aaKnown RBP15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 CDYL2Q8N8U2 506 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 FAM13CQ8NE31 585 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 ZNF675Q8TD23 568 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 ZNF681Q96N22 645 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 FAIM2Q9BWQ8 316 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 ANGPTL4Q9BY76 406 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 MAT2BQ9NZL9 334 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 RNF6Q9Y252 685 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 OTOGQ6ZRI0 2925 aa15.7■□□□□ 0.1
MAP1LC3B-208ENST00000570189 CSMD2Q7Z408 3487 aa15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 CCDC151A5D8V7 595 aa15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 NPIPA2E9PIF3 369 aa15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 NPIPA3F8WFD2 350 aa15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 SNX4O95219 450 aa15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 ESRRBO95718 433 aa15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 CELA3AP09093 270 aa15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 DRD2P14416 443 aa15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 TSPAN8P19075 237 aa15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 ENDOUP21128 410 aaKnown RBP15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 SSTR2P30874 369 aa15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 RPP38P78345 283 aaKnown RBP15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 CEBPEQ15744 281 aa15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 SPIN4Q56A73 249 aa15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 TEX35Q5T0J7 233 aa15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 HLA-DQA1Q5Y7H0 255 aa15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 TDRPQ86YL5 185 aa15.69■□□□□ 0.1
MAP1LC3B-208ENST00000570189 SAMD14Q8IZD0 417 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms