RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 RNH1P13489 461 aaKnown RBP9.38□□□□□ -0.91
GDE1-205ENST00000569899 ATP6V1B2P21281 511 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 TLX1P31314 330 aaPredicted RBP9.38□□□□□ -0.91
GDE1-205ENST00000569899 OR1D4P47884 311 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 OR4D2P58180 307 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 RPS26P62854 115 aaKnown RBP9.38□□□□□ -0.91
GDE1-205ENST00000569899 FOLH1Q04609 750 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 TRA2AQ13595 282 aaKnown RBP eCLIP9.38□□□□□ -0.91
GDE1-205ENST00000569899 CCNIQ14094 377 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 LTB4RQ15722 352 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 CEBPEQ15744 281 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 FAM214AQ32MH5 1076 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 C6orf163Q5TEZ5 329 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 C1orf189Q5VU69 101 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 NIPAL1Q6NVV3 410 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 NATD1Q8N6N6 113 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 HIPK4Q8NE63 616 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 OR9A2Q8NGT5 310 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 OR10A6Q8NH74 314 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 ZFP28Q8NHY6 868 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 ZFP90Q8TF47 636 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 ASB9Q96DX5 294 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 ZNF681Q96N22 645 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 RSRP1Q9BUV0 290 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 KAT8Q9H7Z6 458 aaKnown RBP9.38□□□□□ -0.91
GDE1-205ENST00000569899 TPT1P8Q9HAU6 139 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 ACSS1Q9NUB1 689 aaPredicted RBP9.38□□□□□ -0.91
GDE1-205ENST00000569899 GIMAP4Q9NUV9 329 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 SERTAD3Q9UJW9 196 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 RARRES3Q9UL19 164 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 PCDHGB4Q9UN71 923 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 SNX8Q9Y5X2 465 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 ZNF780BQ9Y6R6 833 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 SEC16AO15027 2179 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 EP300Q09472 2414 aaPredicted RBP9.38□□□□□ -0.91
GDE1-205ENST00000569899 PCNX2A6NKB5 2137 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 A0A1B0GX78 115 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 H0YIG0 161 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 ACOT8O14734 319 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 B4GALT2O60909 372 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 RFPL3O75679 317 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 NTRK1P04629 796 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 CSNK2A2P19784 350 aaPredicted RBP9.38□□□□□ -0.91
GDE1-205ENST00000569899 CSTF2P33240 577 aaKnown RBP eCLIP9.38□□□□□ -0.91
GDE1-205ENST00000569899 CASP9P55211 416 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 ACTR3P61158 418 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 FLOT2Q14254 428 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 ERV3-1Q14264 604 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 MLC1Q15049 377 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 FBXW10Q5XX13 1052 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 PWWP2BQ6NUJ5 590 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 ANGPTL8Q6UXH0 198 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 RBM44Q6ZP01 1051 aaKnown RBP9.38□□□□□ -0.91
GDE1-205ENST00000569899 TMEM126BQ8IUX1 230 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 TRIML2Q8N7C3 387 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 BMPERQ8N8U9 685 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 BHLHE22Q8NFJ8 381 aaPredicted RBP9.38□□□□□ -0.91
GDE1-205ENST00000569899 OR4K14Q8NGD5 310 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 OR51Q1Q8NH59 317 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 FAM120BQ96EK7 910 aaKnown RBP9.38□□□□□ -0.91
GDE1-205ENST00000569899 MVB12AQ96EY5 273 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 ZNF583Q96ND8 569 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 CDC6Q99741 560 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 ECSITQ9BQ95 431 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 SRPK3Q9UPE1 567 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 EVPLLA8MZ36 301 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 FAM220BPB1ANY3 271 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 ARPC2O15144 300 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 MGRN1O60291 552 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 JRKO75564 520 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 SCRG1O75711 98 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 BCAS2O75934 225 aaPredicted RBP9.37□□□□□ -0.91
GDE1-205ENST00000569899 CPMP14384 443 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 NCK1P16333 377 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 FBLP22087 321 aaKnown RBP9.37□□□□□ -0.91
GDE1-205ENST00000569899 UQCRC2P22695 453 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 CCKBRP32239 447 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 CHI3L1P36222 383 aaPredicted RBP9.37□□□□□ -0.91
GDE1-205ENST00000569899 MC3RP41968 323 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 XCR1P46094 333 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 GZMMP51124 257 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 XKP51811 444 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 MVDP53602 400 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 ARSFP54793 590 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 BNIP2Q12982 314 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 TRIM25Q14258 630 aaKnown RBP9.37□□□□□ -0.91
GDE1-205ENST00000569899 CYP51A1Q16850 503 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 SPDYE7PQ495Y7 208 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.37□□□□□ -0.91
GDE1-205ENST00000569899 ARHGAP40Q5TG30 622 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 STPG1Q5TH74 334 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 YOD1Q5VVQ6 348 aaPredicted RBP9.37□□□□□ -0.91
GDE1-205ENST00000569899 RHBDD2Q6NTF9 364 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 TMEM107Q6UX40 140 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 CYP2R1Q6VVX0 501 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 COX15Q7KZN9 410 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 SZRD1Q7Z422 152 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 PIP4P1Q86T03 277 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 CALHM3Q86XJ0 350 aa9.37□□□□□ -0.91
GDE1-205ENST00000569899 LRRC25Q8N386 305 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms