RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 NME5P56597 212 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 SOX8P57073 446 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 IRX1P78414 480 aaPredicted RBP11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 MGAT2Q10469 447 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 SF3A3Q12874 501 aaKnown RBP eCLIP11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 AIMP2Q13155 320 aaKnown RBP11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 LTB4RQ15722 352 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 PRICKLE4Q2TBC4 344 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 METTL21CQ5VZV1 264 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 JMJD6Q6NYC1 403 aaPredicted RBP11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 SPATA21Q7Z572 469 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 CCDC116Q8IYX3 515 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 APCDD1LQ8NCL9 501 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 MORN4Q8NDC4 146 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 B3GNT7Q8NFL0 401 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 M1APQ8TC57 530 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 CPT1CQ8TCG5 803 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 SLC2A12Q8TD20 617 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 ZNF675Q8TD23 568 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 ELP5Q8TE02 316 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 CTHRC1Q96CG8 243 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 RBM18Q96H35 190 aaKnown RBP11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 RILPQ96NA2 401 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 AMDHD1Q96NU7 426 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 BBS4Q96RK4 519 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 MFRPQ9BY79 579 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 NSRP1Q9H0G5 558 aaKnown RBP11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 ZNF552Q9H707 407 aaPredicted RBP11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 ATP13A2Q9NQ11 1180 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 MAT2BQ9NZL9 334 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 ZIM2Q9NZV7 527 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 ADAM21Q9UKJ8 722 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 COPG1Q9Y678 874 aaKnown RBP11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 CLCA3PQ9Y6N3 262 aa11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 SPTAN1Q13813 2472 aaKnown RBP11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 SPTBN1Q01082 2364 aaKnown RBP11.98□□□□□ -0.49
CNEP1R1-211ENST00000569647 CPAMD8Q8IZJ3 1885 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 HRKO00198 91 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 SNX3O60493 162 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 IGKV3-11P04433 115 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 CT62P0C5K7 136 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 TNNI3P19429 210 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 S1PR1P21453 382 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 NT5EP21589 574 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 MPIP34949 423 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 WNT3P56703 355 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 PHC1P78364 1004 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 FUT7Q11130 342 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 MAP4K2Q12851 820 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 RPS6KA2Q15349 733 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 DPY19L1Q2PZI1 675 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 BTBD16Q32M84 506 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 SPANXN4Q5MJ08 99 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 CPTPQ5TA50 214 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 SLC6A19Q695T7 634 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 FAM111BQ6SJ93 734 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 GALNT12Q8IXK2 581 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 KBTBD2Q8IY47 623 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 MIER2Q8N344 545 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 NATD1Q8N6N6 113 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 ZNF321PQ8N8H1 164 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 Q8NA96 180 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 OR8J2Q8NGG1 315 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 OR9I1Q8NGQ6 314 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 OR9A2Q8NGT5 310 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 DOK4Q8TEW6 326 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 ZNF721Q8TF20 911 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 RIT1Q92963 219 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 CIDECQ96AQ7 238 aaPredicted RBP11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 SENP5Q96HI0 755 aaPredicted RBP11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 FBXL20Q96IG2 436 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 PRPF18Q99633 342 aaKnown RBP11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 ELAC2Q9BQ52 826 aaKnown RBP11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 DUSP26Q9BV47 211 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 BHLHE41Q9C0J9 482 aaPredicted RBP11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 GLIPR2Q9H4G4 154 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 MMP25Q9NPA2 562 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 ACSS1Q9NUB1 689 aaPredicted RBP11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 ATAD3AQ9NVI7 634 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 ZNF639Q9UID6 485 aa11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 ZNF223Q9UK11 482 aaPredicted RBP11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 USP9YO00507 2555 aaPredicted RBP11.97□□□□□ -0.49
CNEP1R1-211ENST00000569647 ZGRF1Q86YA3 2104 aa11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 C9JVG2 144 aa11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 DYRK3O43781 588 aa11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 SCN2BO60939 215 aa11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 SLC22A3O75751 556 aa11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 CLPSP04118 112 aa11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 ALPPP05187 535 aa11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 IFI6P09912 130 aa11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 ICAM2P13598 275 aa11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 NCBP2P52298 156 aaKnown RBP eCLIP11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 STX1BP61266 288 aa11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 SRSF11Q05519 484 aaKnown RBP11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 SQLEQ14534 574 aa11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 ZNF267Q14586 743 aaPredicted RBP11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 MLC1Q15049 377 aa11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 FAM174BQ3ZCQ3 159 aa11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 ZNF628Q5EBL2 1059 aa11.96□□□□□ -0.49
CNEP1R1-211ENST00000569647 OR4F3Q6IEY1 312 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms