RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 RFTN2Q52LD8 501 aaPredicted RBP13.46□□□□□ -0.25
COMMD4-225ENST00000569245 SPIN4Q56A73 249 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 ZNF468Q5VIY5 522 aaPredicted RBP13.46□□□□□ -0.25
COMMD4-225ENST00000569245 FAM91A1Q658Y4 838 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 TMEM198Q66K66 360 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 SLC25A25Q6KCM7 469 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 C6orf89Q6UWU4 347 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 HSDL2Q6YN16 418 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 METTL4Q8N3J2 472 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 FNDC5Q8NAU1 212 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 FAM98AQ8NCA5 519 aaKnown RBP13.46□□□□□ -0.25
COMMD4-225ENST00000569245 MORN4Q8NDC4 146 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 SSC4DQ8WTU2 575 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 PTPMT1Q8WUK0 201 aaPredicted RBP13.46□□□□□ -0.25
COMMD4-225ENST00000569245 CHTF18Q8WVB6 975 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 NR4A3Q92570 626 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 APIPQ96GX9 242 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 SLX1AQ9BQ83 275 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 HES7Q9BYE0 225 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 NMUR2Q9GZQ4 415 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 DDX31Q9H8H2 851 aaKnown RBP13.46□□□□□ -0.25
COMMD4-225ENST00000569245 LIN28AQ9H9Z2 209 aaKnown RBP13.46□□□□□ -0.25
COMMD4-225ENST00000569245 NOP53Q9NZM5 478 aaKnown RBP13.46□□□□□ -0.25
COMMD4-225ENST00000569245 COPS7AQ9UBW8 275 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 PPIEQ9UNP9 301 aaKnown RBP13.46□□□□□ -0.25
COMMD4-225ENST00000569245 SHANK1Q9Y566 2161 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 SCN2AQ99250 2005 aa13.46□□□□□ -0.26
COMMD4-225ENST00000569245 A0A0A6YYD5 115 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 GLOD5A6NK44 160 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 CDK2AP1O14519 115 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 SLC22A2O15244 555 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 TMPRSS11DO60235 418 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 FGF17O60258 216 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 OR10H2O60403 315 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 ITGA10O75578 1167 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 NEURL1O76050 574 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 KLK1P06870 262 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 NR2F6P10588 404 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 IDO1P14902 403 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 NCF2P19878 526 aaPredicted RBP13.45□□□□□ -0.26
COMMD4-225ENST00000569245 MAPK1P28482 360 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 HLCSP50747 726 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 GPR143P51810 404 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 RPL38P63173 70 aaKnown RBP13.45□□□□□ -0.26
COMMD4-225ENST00000569245 FOLH1Q04609 750 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 SQLEQ14534 574 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 CCNYL2Q5T2Q4 361 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 GALNT18Q6P9A2 607 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 GFRALQ6UXV0 394 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 TRPM8Q7Z2W7 1104 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 PAGE2Q7Z2X7 111 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 GALNTL5Q7Z4T8 443 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 FITM2Q8N6M3 262 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 PPWD1Q96BP3 646 aaKnown RBP13.45□□□□□ -0.26
COMMD4-225ENST00000569245 SCMH1Q96GD3 660 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 ZNF717Q9BY31 904 aaPredicted RBP13.45□□□□□ -0.26
COMMD4-225ENST00000569245 AIG1Q9NVV5 245 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 SEC14L3Q9UDX4 400 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 ZNF223Q9UK11 482 aaPredicted RBP13.45□□□□□ -0.26
COMMD4-225ENST00000569245 EIF3LQ9Y262 564 aaKnown RBP13.45□□□□□ -0.26
COMMD4-225ENST00000569245 SLC5A6Q9Y289 635 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 ASB4Q9Y574 426 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 PCDHGB6Q9Y5F9 930 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 ESPL1Q14674 2120 aa13.45□□□□□ -0.26
COMMD4-225ENST00000569245 USP9XQ93008 2570 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-225ENST00000569245 A0A1W2PR48 441 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 CCT8L1PA6NM43 557 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 WWP2O00308 870 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 EBAG9O00559 213 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 OR2J2O76002 312 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 UNC5CO95185 931 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 PRPS2P11908 318 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 MST1P26927 711 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 TRHRP34981 398 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-225ENST00000569245 STT3AP46977 705 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 SSR4P51571 173 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 KCNK10P57789 538 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 PLIN5Q00G26 463 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 ALDH6A1Q02252 535 aaKnown RBP13.44□□□□□ -0.26
COMMD4-225ENST00000569245 ACSM2AQ08AH3 577 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 BIKQ13323 160 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 IL23RQ5VWK5 629 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 ACSM2BQ68CK6 577 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 ZNF324BQ6AW86 544 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-225ENST00000569245 C16orf47Q6ZP98 133 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-225ENST00000569245 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-225ENST00000569245 SLC2A12Q8TD20 617 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 ERP27Q96DN0 273 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 C1orf50Q9BV19 199 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 CCDC106Q9BWC9 280 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 MRPL1Q9BYD6 325 aaKnown RBP13.44□□□□□ -0.26
COMMD4-225ENST00000569245 BRINP2Q9C0B6 783 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 SDR39U1Q9NRG7 319 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-225ENST00000569245 TMEM45AQ9NWC5 275 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 ERRFI1Q9UJM3 462 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-225ENST00000569245 ADAM29Q9UKF5 820 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 ERVK-11Q9UQG0 969 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 YARS2Q9Y2Z4 477 aaKnown RBP13.44□□□□□ -0.26
COMMD4-225ENST00000569245 GPR45Q9Y5Y3 372 aa13.44□□□□□ -0.26
COMMD4-225ENST00000569245 WASHC1A8K0Z3 465 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms