RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 SH3BP4Q9P0V3 963 aa24.25■■□□□ 1.47
NME3-209ENST00000566600 ATP6V1HQ9UI12 483 aa24.25■■□□□ 1.47
NME3-209ENST00000566600 ZNF639Q9UID6 485 aa24.25■■□□□ 1.47
NME3-209ENST00000566600 TMEM200CA6NKL6 621 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 SCAMP2O15127 329 aaKnown RBP24.24■■□□□ 1.47
NME3-209ENST00000566600 G6PDP11413 515 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 S1PR1P21453 382 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 CYB561P49447 251 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 HLCSP50747 726 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 OC90Q02509 493 aaPredicted RBP24.24■■□□□ 1.47
NME3-209ENST00000566600 MPEG1Q2M385 716 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 PLEKHN1Q494U1 663 aaPredicted RBP24.24■■□□□ 1.47
NME3-209ENST00000566600 ZNF628Q5EBL2 1059 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 FAM111BQ6SJ93 734 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 SPATA19Q7Z5L4 167 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 TMEM156Q8N614 296 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 NATD1Q8N6N6 113 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 ZNF615Q8N8J6 731 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 OR9A2Q8NGT5 310 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 ZFP28Q8NHY6 868 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 SLCO1B3Q9NPD5 702 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 ATAD3AQ9NVI7 634 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 CSAG2Q9Y5P2 127 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 USH1CQ9Y6N9 552 aa24.24■■□□□ 1.47
NME3-209ENST00000566600 DYNC1I1O14576 645 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 PRAMEF2O60811 474 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 OR2J2O76002 312 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 TGDSO95455 350 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 F10P00742 488 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 CLPSP04118 112 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 EPHA3P29320 983 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 CD96P40200 585 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 CLDN8P56748 225 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 C21orf58P58505 322 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 LTB4RQ15722 352 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 PRSS53Q2L4Q9 553 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 HLA-DQA1Q5Y7H0 255 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 GPALPP1Q8IXQ4 340 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 CATSPER1Q8NEC5 780 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 ACTRT2Q8TDY3 377 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 ZBED6CLQ96FA7 236 aaPredicted RBP24.23■■□□□ 1.47
NME3-209ENST00000566600 AMDHD1Q96NU7 426 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 GAL3ST4Q96RP7 486 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 WWTR1Q9GZV5 400 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 WDR55Q9H6Y2 383 aaPredicted RBP24.23■■□□□ 1.47
NME3-209ENST00000566600 TRIM45Q9H8W5 580 aaPredicted RBP24.23■■□□□ 1.47
NME3-209ENST00000566600 BCAP29Q9UHQ4 241 aa24.23■■□□□ 1.47
NME3-209ENST00000566600 C2orf92A0A1B0GVN3 265 aa24.22■■□□□ 1.47
NME3-209ENST00000566600 WWP2O00308 870 aa24.22■■□□□ 1.47
NME3-209ENST00000566600 SORBS2O94875 1100 aaKnown RBP24.22■■□□□ 1.47
NME3-209ENST00000566600 DIO3P55073 304 aa24.22■■□□□ 1.47
NME3-209ENST00000566600 EBPQ15125 230 aaKnown RBP24.22■■□□□ 1.47
NME3-209ENST00000566600 OR1C1Q15619 314 aa24.22■■□□□ 1.47
NME3-209ENST00000566600 CPTPQ5TA50 214 aa24.22■■□□□ 1.47
NME3-209ENST00000566600 ANKRD26P1Q6NSI1 321 aa24.22■■□□□ 1.47
NME3-209ENST00000566600 SLC15A4Q8N697 577 aa24.22■■□□□ 1.47
NME3-209ENST00000566600 SLC22A8Q8TCC7 542 aa24.22■■□□□ 1.47
NME3-209ENST00000566600 MAELQ96JY0 434 aaKnown RBP24.22■■□□□ 1.47
NME3-209ENST00000566600 GLIPR2Q9H4G4 154 aa24.22■■□□□ 1.47
NME3-209ENST00000566600 LIN28AQ9H9Z2 209 aaKnown RBP24.22■■□□□ 1.47
NME3-209ENST00000566600 ACSS1Q9NUB1 689 aaPredicted RBP24.22■■□□□ 1.47
NME3-209ENST00000566600 LRFN1Q9P244 771 aa24.22■■□□□ 1.47
NME3-209ENST00000566600 PRODH2Q9UF12 536 aa24.22■■□□□ 1.47
NME3-209ENST00000566600 SMG1Q96Q15 3661 aaKnown RBP24.21■■□□□ 1.47
NME3-209ENST00000566600 GOLGA8QA0A0J9YX86 632 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 GOLGA8OA6NCC3 632 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 GOLGA8NF8WBI6 632 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 ZNF195O14628 629 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 PLOD3O60568 738 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 IFI6P09912 130 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 CD46P15529 392 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 PTGER1P34995 402 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 MRPS35P82673 323 aaKnown RBP24.21■■□□□ 1.47
NME3-209ENST00000566600 TRMT12Q53H54 448 aaKnown RBP24.21■■□□□ 1.47
NME3-209ENST00000566600 PIGGQ5H8A4 983 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 NXNQ6DKJ4 435 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 OPN5Q6U736 354 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 FAM47EQ6ZV65 393 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 RIMKLAQ8IXN7 391 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 Q8NA96 180 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 CEP70Q8NHQ1 597 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 ASB15Q8WXK1 588 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 KAT2AQ92830 837 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 TP53INP1Q96A56 240 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 RASL10BQ96S79 203 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 ANKRD10Q9NXR5 420 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 PCDHGB6Q9Y5F9 930 aa24.21■■□□□ 1.47
NME3-209ENST00000566600 A0A087WV62 115 aa24.2■■□□□ 1.46
NME3-209ENST00000566600 TTLL8A6PVC2 850 aa24.2■■□□□ 1.46
NME3-209ENST00000566600 PLOD2O00469 737 aa24.2■■□□□ 1.46
NME3-209ENST00000566600 CBX7O95931 251 aa24.2■■□□□ 1.46
NME3-209ENST00000566600 FRKP42685 505 aaPredicted RBP24.2■■□□□ 1.46
NME3-209ENST00000566600 EXOSC7Q15024 291 aaKnown RBP24.2■■□□□ 1.46
NME3-209ENST00000566600 SLC9B1Q4ZJI4 515 aa24.2■■□□□ 1.46
NME3-209ENST00000566600 ZNF385BQ569K4 471 aa24.2■■□□□ 1.46
NME3-209ENST00000566600 RPUSD3Q6P087 351 aaKnown RBP24.2■■□□□ 1.46
NME3-209ENST00000566600 EPGNQ6UW88 154 aa24.2■■□□□ 1.46
NME3-209ENST00000566600 C16orf47Q6ZP98 133 aaPredicted RBP24.2■■□□□ 1.46
NME3-209ENST00000566600 PRICKLE2Q7Z3G6 844 aa24.2■■□□□ 1.46
NME3-209ENST00000566600 MAVSQ7Z434 540 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms