RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 BORAQ6PGQ7 559 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 CCDC81Q6ZN84 652 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 RNF111Q6ZNA4 994 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 LRRC69Q6ZNQ3 347 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 SAMD14Q8IZD0 417 aaPredicted RBP11.8□□□□□ -0.52
SF3B3-206ENST00000565990 KRTCAP2Q8N6L1 136 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 NATD1Q8N6N6 113 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 NFAM1Q8NET5 270 aaPredicted RBP11.8□□□□□ -0.52
SF3B3-206ENST00000565990 OR11G2Q8NGC1 345 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 PTPMT1Q8WUK0 201 aaPredicted RBP11.8□□□□□ -0.52
SF3B3-206ENST00000565990 THAP4Q8WY91 577 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 ZCCHC14Q8WYQ9 949 aaKnown RBP11.8□□□□□ -0.52
SF3B3-206ENST00000565990 TSLPQ969D9 159 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 TESCQ96BS2 214 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 TEX37Q96LM6 180 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 IMMP1LQ96LU5 166 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 MESP1Q9BRJ9 268 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 ZNF700Q9H0M5 742 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 ZNF696Q9H7X3 374 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 ZIM2Q9NZV7 527 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 RIMS3Q9UJD0 308 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 UTS2RQ9UKP6 389 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 COPG1Q9Y678 874 aaKnown RBP11.8□□□□□ -0.52
SF3B3-206ENST00000565990 CFAP47Q6ZTR5 3102 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 ANKRD11Q6UB99 2663 aaPredicted RBP11.79□□□□□ -0.52
SF3B3-206ENST00000565990 IGHV1-45A0A0A0MS14 117 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 K7ENP7 123 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 ACOT8O14734 319 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 AIM2O14862 343 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 SCAMP2O15127 329 aaKnown RBP11.79□□□□□ -0.52
SF3B3-206ENST00000565990 SCN2BO60939 215 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 SLC22A3O75751 556 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 LRATO95237 230 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 TNFAIP8O95379 198 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 ATP1B1P05026 303 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 COX6A1P12074 109 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 CPMP14384 443 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 PORP16435 677 aaPredicted RBP11.79□□□□□ -0.52
SF3B3-206ENST00000565990 PEX2P28328 305 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 IL12AP29459 219 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 SOX18P35713 384 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 ALDH9A1P49189 494 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 UCNP55089 124 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 SOX8P57073 446 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 SRSF11Q05519 484 aaKnown RBP11.79□□□□□ -0.52
SF3B3-206ENST00000565990 MLC1Q15049 377 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 PCOLCEQ15113 449 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 MPEG1Q2M385 716 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 SAMD4BQ5PRF9 694 aaKnown RBP11.79□□□□□ -0.52
SF3B3-206ENST00000565990 BROXQ5VW32 411 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 INO80CQ6PI98 192 aaPredicted RBP11.79□□□□□ -0.52
SF3B3-206ENST00000565990 UGT2A3Q6UWM9 527 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 LANCL3Q6ZV70 420 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 NDUFAF7Q7L592 441 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 RAB43Q86YS6 212 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 PCYOX1LQ8NBM8 494 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 GLB1L3Q8NCI6 653 aaPredicted RBP11.79□□□□□ -0.52
SF3B3-206ENST00000565990 OR7A2PQ8NGA2 310 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 OR8J2Q8NGG1 315 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 CLHC1Q8NHS4 586 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 NUDT8Q8WV74 236 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 GFM2Q969S9 779 aaKnown RBP11.79□□□□□ -0.52
SF3B3-206ENST00000565990 PPCDCQ96CD2 204 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 RCN3Q96D15 328 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 RBM18Q96H35 190 aaKnown RBP11.79□□□□□ -0.52
SF3B3-206ENST00000565990 VPS50Q96JG6 964 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 CDRT15Q96T59 188 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 PRPF18Q99633 342 aaKnown RBP11.79□□□□□ -0.52
SF3B3-206ENST00000565990 MRPS26Q9BYN8 205 aaKnown RBP11.79□□□□□ -0.52
SF3B3-206ENST00000565990 DPY30Q9C005 99 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 TRIM15Q9C019 465 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 TRIM4Q9C037 500 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 CLMPQ9H6B4 373 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 SLC52A3Q9NQ40 469 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 P4HTMQ9NXG6 502 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 C19orf25Q9UFG5 118 aaPredicted RBP11.79□□□□□ -0.52
SF3B3-206ENST00000565990 ZNF780BQ9Y6R6 833 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 DOCK10Q96BY6 2186 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 LAMA5O15230 3695 aa11.79□□□□□ -0.52
SF3B3-206ENST00000565990 MED13Q9UHV7 2174 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 IGF2RP11717 2491 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 A0A1W2PS29 197 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 AKAP10O43572 662 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 ERAL1O75616 437 aaKnown RBP11.78□□□□□ -0.52
SF3B3-206ENST00000565990 HPP00738 406 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 SNRPB2P08579 225 aaKnown RBP11.78□□□□□ -0.52
SF3B3-206ENST00000565990 LAMP1P11279 417 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 DDX5P17844 614 aaKnown RBP11.78□□□□□ -0.52
SF3B3-206ENST00000565990 ITPKBP27987 946 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 OTX2P32243 289 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 AQP4P55087 323 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 WNT3P56703 355 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 STX1BP61266 288 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 PHC1P78364 1004 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 ID2Q02363 134 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 DUSP2Q05923 314 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 MGAT2Q10469 447 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 MAP4K2Q12851 820 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 TRIM25Q14258 630 aaKnown RBP11.78□□□□□ -0.52
SF3B3-206ENST00000565990 RPS6KA2Q15349 733 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms