RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ROPN1LQ96C74 230 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 RCN3Q96D15 328 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 SENP5Q96HI0 755 aaPredicted RBP7.27□□□□□ -1.25
CDH1-208ENST00000565810 FBXL20Q96IG2 436 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 CCNL2Q96S94 520 aaPredicted RBP7.27□□□□□ -1.25
CDH1-208ENST00000565810 NPAS2Q99743 824 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 SH3GL1Q99961 368 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 HOPXQ9BPY8 73 aaPredicted RBP7.27□□□□□ -1.25
CDH1-208ENST00000565810 INPP5KQ9BT40 448 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 OR8D2Q9GZM6 311 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 ZNF700Q9H0M5 742 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 RAD21L1Q9H4I0 556 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 SLC52A3Q9NQ40 469 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 SERHLQ9NQF3 203 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 ZCCHC3Q9NUD5 404 aaKnown RBP7.27□□□□□ -1.25
CDH1-208ENST00000565810 ARL8BQ9NVJ2 186 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 MAT2BQ9NZL9 334 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.27□□□□□ -1.25
CDH1-208ENST00000565810 BCAP29Q9UHQ4 241 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 ERVK-19Q9WJR5 959 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 HS3ST3B1Q9Y662 390 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 IGHV1-45A0A0A0MS14 117 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 C15orf38-AP3S2A0A0A6YYH1 394 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 RNF103-CHMP3A0A140T963 221 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 OR6C76A6NM76 312 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 B2RBV5 119 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 FBP2O00757 339 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 SOCS6O14544 535 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 PRAMEF2O60811 474 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 HNRNPCL1O60812 293 aaKnown RBP7.26□□□□□ -1.25
CDH1-208ENST00000565810 SOX30O94993 753 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 HPP00738 406 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 CT62P0C5K7 136 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 COX6A1P12074 109 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 CD1EP15812 388 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 PTGER1P34995 402 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 CPA2P48052 419 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 PRIM2P49643 509 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 NUDT2P50583 147 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 ANXA11P50995 505 aaKnown RBP7.26□□□□□ -1.25
CDH1-208ENST00000565810 CLCN2P51788 898 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 EFNA3P52797 238 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 RRADP55042 308 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 SLC26A5P58743 744 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 MRPS35P82673 323 aaKnown RBP7.26□□□□□ -1.25
CDH1-208ENST00000565810 MGAT2Q10469 447 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 FUT7Q11130 342 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 IL10RAQ13651 578 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 PCOLCEQ15113 449 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 ZNHIT3Q15649 155 aaPredicted RBP7.26□□□□□ -1.25
CDH1-208ENST00000565810 BTBD16Q32M84 506 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 CRTC2Q53ET0 693 aaPredicted RBP7.26□□□□□ -1.25
CDH1-208ENST00000565810 TRMT12Q53H54 448 aaKnown RBP7.26□□□□□ -1.25
CDH1-208ENST00000565810 LRIF1Q5T3J3 769 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 HLA-DQA1Q5Y7H0 255 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 ZCCHC12Q6PEW1 402 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 C6orf89Q6UWU4 347 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 C16orf89Q6UX73 402 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 HACD2Q6Y1H2 254 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 DNAJC14Q6Y2X3 702 aaPredicted RBP7.26□□□□□ -1.25
CDH1-208ENST00000565810 HSDL2Q6YN16 418 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 RNF111Q6ZNA4 994 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 DGAT2L6Q6ZPD8 337 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 SLC29A4Q7RTT9 530 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 C6orf120Q7Z4R8 191 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 PPP1R32Q7Z5V6 425 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 ARPINQ7Z6K5 226 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 MRGPREQ86SM8 312 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 B3GNT7Q8NFL0 401 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 OR7G2Q8NG99 324 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 OR11G2Q8NGC1 345 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 OR52R1Q8NGF1 315 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 M1APQ8TC57 530 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 SLC2A12Q8TD20 617 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 DOK4Q8TEW6 326 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 NCLNQ969V3 563 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 CTHRC1Q96CG8 243 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 LRRC58Q96CX6 371 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 FAM120BQ96EK7 910 aaKnown RBP7.26□□□□□ -1.25
CDH1-208ENST00000565810 VMP1Q96GC9 406 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 DCBLD2Q96PD2 775 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 PHF12Q96QT6 1004 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 CGREF1Q99674 301 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 WDR77Q9BQA1 342 aaPredicted RBP7.26□□□□□ -1.25
CDH1-208ENST00000565810 SLC35A5Q9BS91 424 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 PAIP1Q9H074 479 aaKnown RBP7.26□□□□□ -1.25
CDH1-208ENST00000565810 OR10A5Q9H207 317 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 CXorf36Q9H7Y0 433 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 TPT1P8Q9HAU6 139 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 IL1RL2Q9HB29 575 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 ZNF160Q9HCG1 818 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 SIRT3Q9NTG7 399 aaPredicted RBP7.26□□□□□ -1.25
CDH1-208ENST00000565810 P4HTMQ9NXG6 502 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 MAP10Q9P2G4 905 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 FAF1Q9UNN5 650 aaPredicted RBP7.26□□□□□ -1.25
CDH1-208ENST00000565810 C19orf53Q9UNZ5 99 aaPredicted RBP7.26□□□□□ -1.25
CDH1-208ENST00000565810 CORO2BQ9UQ03 480 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 AP3M1Q9Y2T2 418 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 PCDHB14Q9Y5E9 798 aa7.26□□□□□ -1.25
CDH1-208ENST00000565810 SEC16AO15027 2179 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms