RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 ACOD1A6NK06 481 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 TXNL1O43396 289 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 SEMA4FO95754 770 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 CCDC159P0C7I6 412 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 FOSL2P15408 326 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 CALML3P27482 149 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 SPRP35270 261 aaPredicted RBP3.57□□□□□ -1.84
CHD9-215ENST00000565442 AFF2P51816 1311 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 ATXN3P54252 364 aaPredicted RBP3.57□□□□□ -1.84
CHD9-215ENST00000565442 GAMTQ14353 236 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 TMEM44Q2T9K0 475 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 HKDC1Q2TB90 917 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 KRTAP13-3Q3SY46 172 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 PARP10Q53GL7 1025 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 EMBQ6PCB8 327 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 REG3GQ6UW15 175 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 ISLR2Q6UXK2 745 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 TMEM26Q6ZUK4 368 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 GPR142Q7Z601 462 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 PHC2Q8IXK0 858 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 C17orf47Q8NEP4 570 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 UBE2Q2Q8WVN8 375 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 TMEM37Q8WXS4 190 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 RASL10AQ92737 203 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 ACCSQ96QU6 501 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 FTHL17Q9BXU8 183 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 NACA2Q9H009 215 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 Q9HAA7 133 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 LHX3Q9UBR4 397 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 SPATA2Q9UM82 520 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 PLA2G4CQ9UP65 541 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 ZNF175Q9Y473 711 aa3.57□□□□□ -1.84
CHD9-215ENST00000565442 PTPRUQ92729 1446 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 IGHV3-16A0A0C4DH30 117 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 BCLAF3A2AJT9 711 aaKnown RBP3.56□□□□□ -1.84
CHD9-215ENST00000565442 ADAM12O43184 909 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 TGFAP01135 160 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 HCKP08631 526 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 CYP11B1P15538 503 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 MAPK3P27361 379 aaPredicted RBP3.56□□□□□ -1.84
CHD9-215ENST00000565442 SHC1P29353 583 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 PRELPP51888 382 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 RAG2P55895 527 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 GSTO1P78417 241 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 COX10Q12887 443 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 KARSQ15046 597 aaKnown RBP3.56□□□□□ -1.84
CHD9-215ENST00000565442 ZKSCAN8Q15776 578 aaPredicted RBP3.56□□□□□ -1.84
CHD9-215ENST00000565442 LPAL2Q16609 132 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 CCL14Q16627 93 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 ZNF528Q3MIS6 628 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 AGKQ53H12 422 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 AGAP7PQ5VUJ5 663 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 RHBDD2Q6NTF9 364 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 CWC27Q6UX04 472 aaKnown RBP3.56□□□□□ -1.84
CHD9-215ENST00000565442 SH2D6Q7Z4S9 175 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 GTSCR1Q86UQ5 136 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 SLC25A42Q86VD7 318 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 KDM8Q8N371 416 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 HDDC3Q8N4P3 179 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 COLGALT1Q8NBJ5 622 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 FAM111AQ96PZ2 611 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 UBXN6Q9BZV1 441 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 KRT23Q9C075 422 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 ELL3Q9HB65 397 aaPredicted RBP3.56□□□□□ -1.84
CHD9-215ENST00000565442 ADGRL4Q9HBW9 690 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 NRN1Q9NPD7 142 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 CNOT2Q9NZN8 540 aaKnown RBP3.56□□□□□ -1.84
CHD9-215ENST00000565442 SEC14L4Q9UDX3 406 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 MIOXQ9UGB7 285 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 TUBGCP4Q9UGJ1 667 aa3.56□□□□□ -1.84
CHD9-215ENST00000565442 PIN4Q9Y237 131 aaKnown RBP3.56□□□□□ -1.84
CHD9-215ENST00000565442 ZMYM6O95789 1325 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 FAM205AQ6ZU69 1335 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 RNF212BA8MTL3 300 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 ARPC1BO15143 372 aaKnown RBP3.55□□□□□ -1.84
CHD9-215ENST00000565442 GALR3O60755 368 aaPredicted RBP3.55□□□□□ -1.84
CHD9-215ENST00000565442 STAM2O75886 525 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 OAS1P00973 400 aaKnown RBP3.55□□□□□ -1.84
CHD9-215ENST00000565442 IGHG3P01860 377 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 MT-ND1P03886 318 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 FCGR3AP08637 254 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 HOXD4P09016 255 aaPredicted RBP3.55□□□□□ -1.84
CHD9-215ENST00000565442 ACADSP16219 412 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 UCP1P25874 307 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 RPA1P27694 616 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 TMOD1P28289 359 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 MAT2AP31153 395 aaKnown RBP3.55□□□□□ -1.84
CHD9-215ENST00000565442 SLC26A5P58743 744 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 NME3Q13232 169 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 SLC1A5Q15758 541 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 HAGHQ16775 308 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 ANKRD55Q3KP44 614 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 CCDC92Q53HC0 331 aaPredicted RBP3.55□□□□□ -1.84
CHD9-215ENST00000565442 FAM182AQ5T1J6 154 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 LEMD1Q68G75 181 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 ARMCX5Q6P1M9 558 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 LUZP1Q86V48 1076 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 PYROXD2Q8N2H3 581 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 ZNF491Q8N8L2 437 aa3.55□□□□□ -1.84
CHD9-215ENST00000565442 MRPL43Q8N983 215 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms