RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 HIC2Q96JB3 615 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 NAA50Q9GZZ1 169 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 TUBG2Q9NRH3 451 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 FAM120CQ9NX05 1096 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 MALT1Q9UDY8 824 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ITPR1Q14643 2758 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 UNC119BA6NIH7 251 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ZNF208O43345 1280 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 PPM1BO75688 479 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 TFPTP0C1Z6 253 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 AKT2P31751 481 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 MTHFRP42898 656 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ARF3P61204 181 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 ARF1P84077 181 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 LCP2Q13094 533 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 KLF10Q13118 480 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 RAB12Q6IQ22 244 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 C19orf35Q6ZS72 473 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ZSCAN4Q8NAM6 433 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 COL26A1Q96A83 441 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 RBM18Q96H35 190 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 OR2AG1Q9H205 316 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 B4GALT6Q9UBX8 382 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 LGALS13Q9UHV8 139 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SCP2D1Q9UJQ7 156 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ASPDHA6ND91 283 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 C4orf47A7E2U8 309 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PGRMC2O15173 223 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SLC16A5O15375 505 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 NADKO95544 446 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 IGLV3-25P01717 112 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 DNTTP04053 509 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 KLK3P07288 261 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 UROSP10746 265 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PSMD8P48556 350 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SLC18A2Q05940 514 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 RAPSNQ13702 412 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 IRF4Q15306 451 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 MAPKAPK3Q16644 382 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 UNC50Q53HI1 259 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 TMEM236Q5W0B7 351 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 RPL22L1Q6P5R6 122 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.19□□□□□ -1.9
CHD9-213ENST00000564845 PGBD3Q8N328 593 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 RNF217Q8TC41 542 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 RNF128Q8TEB7 428 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 DAZLQ92904 295 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 RNFT2Q96EX2 444 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 IMP4Q96G21 291 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 APIPQ96GX9 242 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CHRDL1Q9BU40 450 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 INSL6Q9Y581 213 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 LRBAP50851 2863 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 MEGF11A6BM72 1044 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CDHR4A6H8M9 788 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CCDC182A6NF36 153 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 YY2O15391 372 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PRAMEF4O60810 478 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CLPXO76031 633 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SCELO95171 688 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 IFNA10P01566 189 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 IFNA7P01567 189 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 IFNA4P05014 189 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 EPHX1P07099 455 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 THRBP10828 461 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PRG2P13727 222 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 TGM4P49221 684 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 KCNC4Q03721 635 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CACNG1Q06432 222 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 FNDC3BQ53EP0 1204 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 ZNF678Q5SXM1 525 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PRAMEF9Q5VWM5 478 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 LRRC74BQ6ZQY2 392 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PRSS58Q8IYP2 241 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 TEX47Q8TBZ9 253 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 MVB12AQ96EY5 273 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 COX4I2Q96KJ9 171 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 RTKNQ9BST9 563 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 ZDHHC5Q9C0B5 715 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 STRADBQ9C0K7 418 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SMOC1Q9H4F8 434 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 ANKRD19PQ9H560 264 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 FAM86C1Q9NVL1 165 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SLC23A2Q9UGH3 650 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 GMEB2Q9UKD1 530 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CNOT11Q9UKZ1 510 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 DHRS7Q9Y394 339 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CKAP5Q14008 2032 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 MEN1O00255 615 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PSMG1O95456 288 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 F11P03951 625 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 LTA4HP09960 611 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 ELFN1P0C7U0 828 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SRCP12931 536 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 HTR2BP41595 481 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 KIR3DL1P43629 444 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 ZNF45Q02386 682 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 ELAVL3Q14576 367 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 ACTBL2Q562R1 376 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PSMG4Q5JS54 123 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms