RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 DPY30Q9C005 99 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 WDR55Q9H6Y2 383 aaPredicted RBP14.84□□□□□ -0.03
RAB40C-208ENST00000564703 LIN28AQ9H9Z2 209 aaKnown RBP14.84□□□□□ -0.03
RAB40C-208ENST00000564703 MAT2BQ9NZL9 334 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 PRODH2Q9UF12 536 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 ATP6V1HQ9UI12 483 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 EXO1Q9UQ84 846 aaKnown RBP14.84□□□□□ -0.03
RAB40C-208ENST00000564703 ATRXP46100 2492 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 CHD6Q8TD26 2715 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 TTLL8A6PVC2 850 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 OR2J2O76002 312 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 CT62P0C5K7 136 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 CD96P40200 585 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 TNFSF10P50591 281 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 PTGR1Q14914 329 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 ZNF169Q14929 603 aaPredicted RBP14.83□□□□□ -0.04
RAB40C-208ENST00000564703 CEBPEQ15744 281 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 MPEG1Q2M385 716 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 SLC6A19Q695T7 634 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 OGFOD2Q6N063 350 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 ANKRD26P1Q6NSI1 321 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 OPN5Q6U736 354 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 RGS9BPQ6ZS82 235 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 Q6ZS92 163 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 ARMC10Q8N2F6 343 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 OR9A2Q8NGT5 310 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 SLC22A8Q8TCC7 542 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 ZNF675Q8TD23 568 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 ACTRT2Q8TDY3 377 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 ASB15Q8WXK1 588 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 KAT2AQ92830 837 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 TMEM125Q96AQ2 219 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 RYDENQ9NUL5 291 aaKnown RBP14.83□□□□□ -0.04
RAB40C-208ENST00000564703 ANKRD10Q9NXR5 420 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 LRFN1Q9P244 771 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 ERVK-11Q9UQG0 969 aa14.83□□□□□ -0.04
RAB40C-208ENST00000564703 COL6A6A6NMZ7 2263 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 TCP11X1B4DZS4 312 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 SCAMP2O15127 329 aaKnown RBP14.82□□□□□ -0.04
RAB40C-208ENST00000564703 SUV39H1O43463 412 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 PRKNO60260 465 aaPredicted RBP14.82□□□□□ -0.04
RAB40C-208ENST00000564703 MAN1A2O60476 641 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 PRAMEF2O60811 474 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 CD46P15529 392 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 CD97P48960 835 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 HLCSP50747 726 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 DIO3P55073 304 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 DUSP2Q05923 314 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 TUBA3CQ13748 450 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 PDE7AQ13946 482 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 EXOSC7Q15024 291 aaKnown RBP14.82□□□□□ -0.04
RAB40C-208ENST00000564703 LTB4RQ15722 352 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 PGS1Q32NB8 556 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 LSM12Q3MHD2 195 aaKnown RBP14.82□□□□□ -0.04
RAB40C-208ENST00000564703 TUBA3EQ6PEY2 450 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 EPGNQ6UW88 154 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 PRICKLE2Q7Z3G6 844 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 TAGAPQ8N103 731 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 SLC15A4Q8N697 577 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 VPS37AQ8NEZ2 397 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 OR7A2PQ8NGA2 310 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 OR52R1Q8NGF1 315 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 TP53INP1Q96A56 240 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 CTHRC1Q96CG8 243 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 C5orf34Q96MH7 638 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 AMDHD1Q96NU7 426 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 NPAS2Q99743 824 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 GLIPR2Q9H4G4 154 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 ACSS1Q9NUB1 689 aaPredicted RBP14.82□□□□□ -0.04
RAB40C-208ENST00000564703 TAS2R9Q9NYW1 312 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 ZNF639Q9UID6 485 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 SPTA1P02549 2419 aa14.82□□□□□ -0.04
RAB40C-208ENST00000564703 A0A1W2PRB8 838 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 A8MVJ9 347 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 UBDO15205 165 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 POLR3GO15318 223 aaPredicted RBP14.81□□□□□ -0.04
RAB40C-208ENST00000564703 PLOD3O60568 738 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 S1PR1P21453 382 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 TRHRP34981 398 aaPredicted RBP14.81□□□□□ -0.04
RAB40C-208ENST00000564703 PTGER1P34995 402 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 ST13P50502 369 aaKnown RBP14.81□□□□□ -0.04
RAB40C-208ENST00000564703 NR0B1P51843 470 aaKnown RBP14.81□□□□□ -0.04
RAB40C-208ENST00000564703 CLNS1AP54105 237 aaKnown RBP14.81□□□□□ -0.04
RAB40C-208ENST00000564703 NRG3P56975 720 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 DCAF7P61962 342 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 MRPS35P82673 323 aaKnown RBP14.81□□□□□ -0.04
RAB40C-208ENST00000564703 SRSF11Q05519 484 aaKnown RBP14.81□□□□□ -0.04
RAB40C-208ENST00000564703 MGAT2Q10469 447 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 HSPB3Q12988 150 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 OR1C1Q15619 314 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 PRSS53Q2L4Q9 553 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 SLC9B1Q4ZJI4 515 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 ZNF628Q5EBL2 1059 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 PIGGQ5H8A4 983 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 ZNF551Q7Z340 670 aaPredicted RBP14.81□□□□□ -0.04
RAB40C-208ENST00000564703 ZNF605Q86T29 641 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 C9orf40Q8IXQ3 194 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 GPALPP1Q8IXQ4 340 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 KRTCAP2Q8N6L1 136 aa14.81□□□□□ -0.04
RAB40C-208ENST00000564703 ZNF615Q8N8J6 731 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms