RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.4□□□□□ -1.87
CHD9-212ENST00000564641 HMG20BQ9P0W2 317 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.4□□□□□ -1.87
CHD9-212ENST00000564641 CTSZQ9UBR2 303 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 TUBGCP4Q9UGJ1 667 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 CIDEBQ9UHD4 219 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 LRRC42Q9Y546 428 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 ASB3Q9Y575 518 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 MYH15Q9Y2K3 1946 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 COL6A3P12111 3177 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 FOCADQ5VW36 1801 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 PHIPQ8WWQ0 1821 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 A0A1W2PPQ1 181 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 FEZF1A0PJY2 475 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 A4D1N5 150 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 E7ENQ6 273 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 HIP1O00291 1037 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 SUPT3HO75486 399 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 GBAP04062 536 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 GSTA2P09210 222 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 RAB40ALP0C0E4 278 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 IDO1P14902 403 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 FOSL2P15408 326 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 CYP11B2P19099 503 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 ATP6V1C1P21283 382 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 ADORA1P30542 326 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 NT5C2P49902 561 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 ASCL1P50553 236 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 NDUFA8P51970 172 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 UBXN1Q04323 297 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 YWHAHQ04917 246 aaPredicted RBP3.39□□□□□ -1.87
CHD9-212ENST00000564641 GRB14Q14449 540 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 ITIH4Q14624 930 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 MTF1Q14872 753 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 TAB1Q15750 504 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 CDO1Q16878 200 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 SMU1Q2TAY7 513 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 USH1GQ495M9 461 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 ANKRD20A4Q4UJ75 823 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 CMPK2Q5EBM0 449 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 NHSL2Q5HYW2 709 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 ANKRD20A2Q5SQ80 823 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 FAM182AQ5T1J6 154 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 ANKRD20A1Q5TYW2 823 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 ANKRD20A3Q5VUR7 823 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 CES4AQ5XG92 561 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 FAM91A1Q658Y4 838 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 PRR27Q6MZM9 219 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 IRGCQ6NXR0 463 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 TATDN1Q6P1N9 297 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 PPP1R21Q6ZMI0 780 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 CATSPERDQ86XM0 798 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 SIX6OS1Q8N1H7 587 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 C10orf53Q8N6V4 93 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 MLKLQ8NB16 471 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 ERMNQ8TAM6 284 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 CTNNBL1Q8WYA6 563 aaPredicted RBP3.39□□□□□ -1.87
CHD9-212ENST00000564641 RAPGEF5Q92565 580 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 SLAMF9Q96A28 289 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 SPSB1Q96BD6 273 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 HAUS1Q96CS2 278 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 CYYR1Q96J86 154 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 CDHR1Q96JP9 859 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 ATP6V1G3Q96LB4 118 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 GLT1D1Q96MS3 346 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 CCDC43Q96MW1 224 aaKnown RBP3.39□□□□□ -1.87
CHD9-212ENST00000564641 SEPHS2Q99611 448 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 LLPHQ9BRT6 129 aaKnown RBP3.39□□□□□ -1.87
CHD9-212ENST00000564641 PI4K2AQ9BTU6 479 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 NACAP1Q9BZK3 213 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 FAM192AQ9GZU8 254 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 PRO3102Q9H379 93 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 TUBB1Q9H4B7 451 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 RPAP3Q9H6T3 665 aaPredicted RBP3.39□□□□□ -1.87
CHD9-212ENST00000564641 TMBIM4Q9HC24 238 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 TRPV5Q9NQA5 729 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 SLC24A2Q9UI40 661 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 BARX2Q9UMQ3 279 aaPredicted RBP3.39□□□□□ -1.87
CHD9-212ENST00000564641 SNX7Q9UNH6 387 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 TMED5Q9Y3A6 229 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 BZW2Q9Y6E2 419 aaKnown RBP3.39□□□□□ -1.87
CHD9-212ENST00000564641 DNAH12Q6ZR08 3092 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 SYNRGQ9UMZ2 1314 aa3.39□□□□□ -1.87
CHD9-212ENST00000564641 DDX60LQ5H9U9 1706 aaKnown RBP3.39□□□□□ -1.87
CHD9-212ENST00000564641 ROBO3Q96MS0 1386 aa3.38□□□□□ -1.87
CHD9-212ENST00000564641 ZNF236Q9UL36 1845 aa3.38□□□□□ -1.87
CHD9-212ENST00000564641 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.38□□□□□ -1.87
CHD9-212ENST00000564641 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.38□□□□□ -1.87
CHD9-212ENST00000564641 TRIM77I1YAP6 450 aa3.38□□□□□ -1.87
CHD9-212ENST00000564641 CLDN4O14493 209 aa3.38□□□□□ -1.87
CHD9-212ENST00000564641 TEX28O15482 410 aa3.38□□□□□ -1.87
CHD9-212ENST00000564641 TRAPPC3O43617 180 aa3.38□□□□□ -1.87
CHD9-212ENST00000564641 JAK2O60674 1132 aa3.38□□□□□ -1.87
CHD9-212ENST00000564641 CABYRO75952 493 aa3.38□□□□□ -1.87
CHD9-212ENST00000564641 DDHD2O94830 711 aa3.38□□□□□ -1.87
CHD9-212ENST00000564641 YEATS4O95619 227 aa3.38□□□□□ -1.87
CHD9-212ENST00000564641 GP1BBP13224 206 aa3.38□□□□□ -1.87
CHD9-212ENST00000564641 EEF2P13639 858 aaKnown RBP3.38□□□□□ -1.87
CHD9-212ENST00000564641 DARSP14868 501 aaKnown RBP3.38□□□□□ -1.87
CHD9-212ENST00000564641 STMN1P16949 149 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms