RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 SLC52A3Q9NQ40 469 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 GIMAP4Q9NUV9 329 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 ATAD3AQ9NVI7 634 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 MAPRE3Q9UPY8 281 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 ERVK-19Q9WJR5 959 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 TMEM200CA6NKL6 621 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 A6NL46 340 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 CBX7O95931 251 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 NTSP30990 170 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 KIR3DL1P43629 444 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 ATP4BP51164 291 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 CLNS1AP54105 237 aaKnown RBP11.6□□□□□ -0.55
KARS-204ENST00000564578 SLC37A1P57057 533 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 HSPB3Q12988 150 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 MLC1Q15049 377 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 LINC00303Q3SY05 128 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 FHL5Q5TD97 284 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 H3F3CQ6NXT2 135 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 KBTBD2Q8IY47 623 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 ZNF615Q8N8J6 731 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 GLB1L3Q8NCI6 653 aaPredicted RBP11.6□□□□□ -0.55
KARS-204ENST00000564578 FDCSPQ8NFU4 85 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 OR7G2Q8NG99 324 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 ZBED6CLQ96FA7 236 aaPredicted RBP11.6□□□□□ -0.55
KARS-204ENST00000564578 NPAS2Q99743 824 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 TRIM4Q9C037 500 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 TRIM33Q9UPN9 1127 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 IGSF10Q6WRI0 2623 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 A0A1W2PRB8 838 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 PLOD2O00469 737 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 PLOD3O60568 738 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 PGRP06401 933 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 ITGA3P26006 1051 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 CDK9P50750 372 aaKnown RBP11.59□□□□□ -0.55
KARS-204ENST00000564578 MANFP55145 182 aaKnown RBP11.59□□□□□ -0.55
KARS-204ENST00000564578 HBA1P69905 142 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 RAPSNQ13702 412 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 DPY19L1Q2PZI1 675 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 CLECL1Q8IZS7 167 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 CPSF7Q8N684 471 aaKnown RBP11.59□□□□□ -0.55
KARS-204ENST00000564578 PSMA8Q8TAA3 256 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 BRIX1Q8TDN6 353 aaKnown RBP11.59□□□□□ -0.55
KARS-204ENST00000564578 TTC9Q92623 222 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 ELP4Q96EB1 424 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 VMP1Q96GC9 406 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 CCT8L2Q96SF2 557 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 LHPPQ9H008 270 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 ZNF552Q9H707 407 aaPredicted RBP11.59□□□□□ -0.55
KARS-204ENST00000564578 SAR1AQ9NR31 198 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 SIRT3Q9NTG7 399 aaPredicted RBP11.59□□□□□ -0.55
KARS-204ENST00000564578 CCDC167Q9P0B6 97 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 KALRNO60229 2985 aa11.59□□□□□ -0.55
KARS-204ENST00000564578 TRBV11-1A0A0K0K1C0 115 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 PRSS51A0A1B0GVH4 220 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 UPK1AO00322 258 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 RNASET2O00584 256 aaKnown RBP11.58□□□□□ -0.55
KARS-204ENST00000564578 MAN1A2O60476 641 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 NME6O75414 186 aaPredicted RBP11.58□□□□□ -0.55
KARS-204ENST00000564578 C6orf47O95873 294 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 MC3RP41968 323 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 CLCN2P51788 898 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 POLR2JP52435 117 aaKnown RBP11.58□□□□□ -0.55
KARS-204ENST00000564578 STX1BP61266 288 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 IRX1P78414 480 aaPredicted RBP11.58□□□□□ -0.55
KARS-204ENST00000564578 RCAN2Q14206 197 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 SQLEQ14534 574 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 MYBPC3Q14896 1274 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 EXOSC7Q15024 291 aaKnown RBP11.58□□□□□ -0.55
KARS-204ENST00000564578 B3GNTL1Q67FW5 361 aaPredicted RBP11.58□□□□□ -0.55
KARS-204ENST00000564578 BLOC1S3Q6QNY0 202 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 TMEM107Q6UX40 140 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 ANKRD46Q86W74 232 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 C9orf40Q8IXQ3 194 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 ARMC10Q8N2F6 343 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 OR2L13Q8N349 312 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 NATD1Q8N6N6 113 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 SIRT6Q8N6T7 355 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 VPS33AQ96AX1 596 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 NMUR2Q9GZQ4 415 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 NSRP1Q9H0G5 558 aaKnown RBP11.58□□□□□ -0.55
KARS-204ENST00000564578 DTX4Q9Y2E6 619 aa11.58□□□□□ -0.55
KARS-204ENST00000564578 SPENQ96T58 3664 aaKnown RBP11.58□□□□□ -0.56
KARS-204ENST00000564578 A0A087WV62 115 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 FAM234BA2RU67 622 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 DYRK3O43781 588 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 COQ9O75208 318 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 PSMG1O95456 288 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 FAM107AO95990 144 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 IL6P05231 212 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 DDX5P17844 614 aaKnown RBP11.58□□□□□ -0.56
KARS-204ENST00000564578 CALRP27797 417 aaKnown RBP11.58□□□□□ -0.56
KARS-204ENST00000564578 S100A3P33764 101 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 EMDP50402 254 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 POLE2P56282 527 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 RNF4P78317 190 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 UBAP2LQ14157 1087 aaKnown RBP11.58□□□□□ -0.56
KARS-204ENST00000564578 FCRLBQ6BAA4 426 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 JMJD6Q6NYC1 403 aaPredicted RBP11.58□□□□□ -0.56
KARS-204ENST00000564578 HSDL2Q6YN16 418 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 C16orf47Q6ZP98 133 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms