RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 MRPL1Q9BYD6 325 aaKnown RBP15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 OR10A5Q9H207 317 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 ELOVL6Q9H5J4 265 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 TNFRSF10DQ9UBN6 386 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 B4GALT7Q9UBV7 327 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 KCNN3Q9UGI6 736 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 PCDHA9Q9Y5H5 950 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 NPFFR2Q9Y5X5 522 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 ANKRD17O75179 2603 aaKnown RBP15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 A0A0G2JNJ9 132 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 A0A1B0GTL3 188 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 C1orf226A1L170 272 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 TRIM49D1C9J1S8 452 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 SNX4O95219 450 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 PORP16435 677 aaPredicted RBP15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 NAGAP17050 411 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 ADH7P40394 386 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 ARL1P40616 181 aaPredicted RBP15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 TMED10P49755 219 aaKnown RBP15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 MGAT2Q10469 447 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 GALNT1Q10472 559 aaPredicted RBP15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 MAP4K2Q12851 820 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 SLC48A1Q6P1K1 146 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 TMEM81Q6P7N7 255 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 TIFABQ6ZNK6 161 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 COMMD6Q7Z4G1 85 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 CLYBLQ8N0X4 340 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 MNS1Q8NEH6 495 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 UBQLN3Q9H347 655 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 Q9UFV3 132 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 TRPS1Q9UHF7 1281 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 ZNF639Q9UID6 485 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 ZNF225Q9UK10 706 aa15.8■□□□□ 0.12
VPS9D1-203ENST00000563798 A0A087WUV0 522 aaPredicted RBP15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 A8MT66 165 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 PPP6CO00743 305 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 ATP1B1P05026 303 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 HPNP05981 417 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 SNRPAP09012 282 aaKnown RBP15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 MAPK12P53778 367 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 NRG3P56975 720 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 TRA2BP62995 288 aaKnown RBP15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 PRICKLE4Q2TBC4 344 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 SLC25A35Q3KQZ1 300 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 FNDC7Q5VTL7 733 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 HLA-DQA1Q5Y7H0 255 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 TMEM198Q66K66 360 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 LETMD1Q6P1Q0 360 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 LCA5Q86VQ0 697 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 ULK2Q8IYT8 1036 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 OR10Q1Q8NGQ4 319 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 IFT81Q8WYA0 676 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 DIO2Q92813 273 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 TM4SF18Q96CE8 201 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 ZNF597Q96LX8 424 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 EXO5Q9H790 373 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 FARSBQ9NSD9 589 aaKnown RBP15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 NMRK1Q9NWW6 199 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 SNX6Q9UNH7 406 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 CCDC168Q8NDH2 2452 aa15.79■□□□□ 0.12
VPS9D1-203ENST00000563798 AKAP9Q99996 3911 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 GOLGA6L10A6NI86 522 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 AHRRA9YTQ3 701 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 POC1B-GALNT4F8VUJ3 575 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 CDH16O75309 829 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 PDYNP01213 254 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 ABHD2P08910 425 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 HSD3B1P14060 373 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 GPX3P22352 226 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 HSD3B2P26439 372 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 SOX18P35713 384 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 CASP3P42574 277 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 FBXW4P57775 412 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 RPP38P78345 283 aaKnown RBP15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 LGSNQ5TDP6 509 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 TMEM64Q6YI46 380 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 CDH24Q86UP0 819 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 LIX1LQ8IVB5 337 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 SELENOMQ8WWX9 145 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 CTHRC1Q96CG8 243 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 TMEM41AQ96HV5 264 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 SLC6A15Q9H2J7 730 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 SLC12A4Q9UP95 1085 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 CFL2Q9Y281 166 aa15.78■□□□□ 0.12
VPS9D1-203ENST00000563798 CTAGE8P0CG41 777 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 CSNK2A2P19784 350 aaPredicted RBP15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 NT5EP21589 574 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 ABCD3P28288 659 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 GCAP28676 217 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 HSD17B3P37058 310 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 CDK9P50750 372 aaKnown RBP15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 CDH13P55290 713 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 CLCQ05315 142 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 CRYZQ08257 329 aaKnown RBP15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 DUSP8Q13202 625 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 SGO1Q5FBB7 561 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 NHSL2Q5HYW2 709 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 C6orf163Q5TEZ5 329 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 SPNS3Q6ZMD2 512 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 SEM1Q6ZVN7 128 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms