RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ELOA3Q8NG57 546 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 OR1J4Q8NGS1 313 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 NEUROG1Q92886 237 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 ADIPOR1Q96A54 375 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 TP53INP1Q96A56 240 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 C11orf24Q96F05 449 aaPredicted RBP6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 C1orf159Q96HA4 380 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 DGAT2Q96PD7 388 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 GAL3ST4Q96RP7 486 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 NDNQ99608 321 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 SLC39A3Q9BRY0 314 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 NT5DC2Q9H857 520 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 TRMT6Q9UJA5 497 aaKnown RBP6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 FBXO5Q9UKT4 447 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 PACSIN2Q9UNF0 486 aaPredicted RBP6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 DYRK1BQ9Y463 629 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 PLCE1Q9P212 2302 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 CAPN14A8MX76 684 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 CDC7O00311 574 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 SCELO95171 688 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 GUCA1CO95843 209 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 ABCB1P08183 1280 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 COX7A2P14406 83 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 PPP3CBP16298 524 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 ATP5A1P25705 553 aaKnown RBP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 GSTM2P28161 218 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 GABRB3P28472 473 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 CDKN2DP55273 166 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 B3GALT5-AS1P59052 145 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 SIRPAP78324 504 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 PCDH1Q08174 1060 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 ZNF844Q08AG5 666 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 GPS1Q13098 491 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 DHX34Q14147 1143 aaKnown RBP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 SLBPQ14493 270 aaKnown RBP eCLIP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 LAPTM4AQ15012 233 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 KCTD19Q17RG1 926 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 RBM20Q5T481 1227 aaKnown RBP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 ARMC3Q5W041 872 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 STAC2Q6ZMT1 411 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 RNF111Q6ZNA4 994 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 PALM2Q8IXS6 379 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 PRR22Q8IZ63 422 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 ST13P4Q8IZP2 240 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 TAGAPQ8N103 731 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 DEPDC4Q8N2C3 294 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 AGGF1Q8N302 714 aaeCLIP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 ACOT4Q8N9L9 421 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 C7orf57Q8NEG2 295 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 TTLQ8NG68 377 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 SMAP2Q8WU79 429 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 C1orf54Q8WWF1 131 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 CCT6BQ92526 530 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 FIG4Q92562 907 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 HGDQ93099 445 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 FBXW5Q969U6 566 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 GTPBP3Q969Y2 492 aaKnown RBP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 ZNF669Q96BR6 464 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 REPS1Q96D71 796 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 ZNF845Q96IR2 970 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 CALR3Q96L12 384 aaKnown RBP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 F2RL3Q96RI0 385 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 NODALQ96S42 347 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 RHNO1Q9BSD3 238 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 TRAF4Q9BUZ4 470 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 GRIP2Q9C0E4 1043 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 KLHL4Q9C0H6 718 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 RNF122Q9H9V4 155 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 GALNT9Q9HCQ5 603 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 SERHLQ9NQF3 203 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 SNX15Q9NRS6 342 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 PTBP2Q9UKA9 531 aaKnown RBP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 ZNF490Q9ULM2 529 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 EXO1Q9UQ84 846 aaKnown RBP6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 KCNE2Q9Y6J6 123 aa6.94□□□□□ -1.3
HERPUD1-206ENST00000563343 IQANK1A0A1B0GTG1 560 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 C2orf92A0A1B0GVN3 265 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 FAM234BA2RU67 622 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 SERINC4A6NH21 518 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 SLC22A20A6NK97 555 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 WASHC1A8K0Z3 465 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 RTCAO00442 366 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 SSX4O60224 188 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 ICOSLGO75144 302 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 CDH16O75309 829 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 PRKRAO75569 313 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 CBR3O75828 277 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 AIFM1O95831 613 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 PTMAP06454 111 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 ENO2P09104 434 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 ALOX15P16050 662 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 TPSB2P20231 275 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 CD22P20273 847 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 ABCD3P28288 659 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 SRD5A2P31213 254 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 SSTR4P31391 388 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 KCNJ5P48544 419 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 TPM4P67936 248 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms